Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
USP47Q96K76 AC011611.1-201ENST00000552179 197 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.77□□□□□ -1.65
USP47Q96K76 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.77□□□□□ -1.65
USP47Q96K76 AC015802.5-201ENST00000607478 399 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.77□□□□□ -1.65
USP47Q96K76 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP47Q96K76 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
USP47Q96K76 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
USP47Q96K76 AC058791.1-201ENST00000608412 3198 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 RNU4-44P-201ENST00000363050 141 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.76□□□□□ -1.65
USP47Q96K76 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
USP47Q96K76 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.76□□□□□ -1.65
USP47Q96K76 MTCO3P17-201ENST00000443775 513 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 MRPS31P2-201ENST00000451581 518 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 AL049873.1-201ENST00000480540 376 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 AC113398.2-201ENST00000507630 558 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.76□□□□□ -1.65
USP47Q96K76 RFPL4AP5-201ENST00000514977 504 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 OR4R3P-201ENST00000525084 838 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.76□□□□□ -1.65
USP47Q96K76 AC092868.3-201ENST00000560515 784 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 MIR4276-201ENST00000584832 70 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.76□□□□□ -1.65
USP47Q96K76 AC074140.1-201ENST00000621617 208 ntBASIC4.76□□□□□ -1.65
USP47Q96K76 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
USP47Q96K76 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
USP47Q96K76 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP47Q96K76 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP47Q96K76 THAP12P8-201ENST00000447914 2115 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USP47Q96K76 RNU1-70P-201ENST00000362618 164 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 SNORA38.1-201ENST00000364172 131 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP47Q96K76 AL122016.1-201ENST00000403365 367 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.75□□□□□ -1.65
USP47Q96K76 AL158071.1-201ENST00000430315 461 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 OR6C71P-201ENST00000432580 913 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.75□□□□□ -1.65
USP47Q96K76 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.75□□□□□ -1.65
USP47Q96K76 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.75□□□□□ -1.65
USP47Q96K76 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.75□□□□□ -1.65
USP47Q96K76 AL136126.1-201ENST00000473603 402 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 AC021205.2-201ENST00000480069 347 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.75□□□□□ -1.65
USP47Q96K76 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.75□□□□□ -1.65
USP47Q96K76 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP47Q96K76 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.75□□□□□ -1.65
USP47Q96K76 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.75□□□□□ -1.65
USP47Q96K76 AC006557.5-201ENST00000603126 811 ntBASIC4.75□□□□□ -1.65
USP47Q96K76 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.75□□□□□ -1.65
USP47Q96K76 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.75□□□□□ -1.65
USP47Q96K76 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP47Q96K76 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.74□□□□□ -1.65
USP47Q96K76 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.74□□□□□ -1.65
USP47Q96K76 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
USP47Q96K76 RNA5SP229-201ENST00000410809 99 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP47Q96K76 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.74□□□□□ -1.65
USP47Q96K76 AJ239321.1-201ENST00000424255 564 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 SETP10-201ENST00000424368 814 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 AC009263.1-201ENST00000441193 1239 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP47Q96K76 AC097262.1-201ENST00000452559 548 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 MTND6P32-201ENST00000457611 483 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 RPL7P38-201ENST00000488396 739 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.74□□□□□ -1.65
USP47Q96K76 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.74□□□□□ -1.65
USP47Q96K76 SNORA70.19-201ENST00000516717 90 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.74□□□□□ -1.65
USP47Q96K76 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.74□□□□□ -1.65
USP47Q96K76 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.74□□□□□ -1.65
USP47Q96K76 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.74□□□□□ -1.65
USP47Q96K76 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.74□□□□□ -1.65
USP47Q96K76 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.74□□□□□ -1.65
USP47Q96K76 AC012493.2-201ENST00000595083 291 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.74□□□□□ -1.65
USP47Q96K76 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.74□□□□□ -1.65
USP47Q96K76 CR392039.4-201ENST00000624968 501 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.74□□□□□ -1.65
USP47Q96K76 AL079305.1-201ENST00000623159 3008 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 HSPA8P19-201ENST00000505359 1517 ntBASIC4.74□□□□□ -1.65
USP47Q96K76 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP47Q96K76 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USP47Q96K76 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.74□□□□□ -1.65
USP47Q96K76 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP47Q96K76 AL133383.2-201ENST00000622958 2336 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.73□□□□□ -1.65
USP47Q96K76 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP47Q96K76 GNG5P1-201ENST00000255500 204 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP47Q96K76 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP47Q96K76 AP002088.1-201ENST00000382740 395 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.73□□□□□ -1.65
USP47Q96K76 RPL30P2-201ENST00000414021 291 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP47Q96K76 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.73□□□□□ -1.65
USP47Q96K76 ATP5C1P1-201ENST00000441945 895 ntBASIC4.73□□□□□ -1.65
USP47Q96K76 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms