Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 UBE2NP1-201ENST00000545592 458 ntBASIC4.25□□□□□ -1.73
RTL9Q8NET4 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.25□□□□□ -1.73
RTL9Q8NET4 AC006557.5-201ENST00000603126 811 ntBASIC4.25□□□□□ -1.73
RTL9Q8NET4 SCARNA15.3-201ENST00000626315 122 ntBASIC4.25□□□□□ -1.73
RTL9Q8NET4 SCARNA4.1-201ENST00000628597 123 ntBASIC4.25□□□□□ -1.73
RTL9Q8NET4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.25□□□□□ -1.73
RTL9Q8NET4 AL355596.1-201ENST00000565399 3996 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 ASNSP1-201ENST00000518311 1939 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RTL9Q8NET4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RTL9Q8NET4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTL9Q8NET4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RTL9Q8NET4 U3.19-201ENST00000390893 196 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.24□□□□□ -1.73
RTL9Q8NET4 RPS26P47-201ENST00000427219 348 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.24□□□□□ -1.73
RTL9Q8NET4 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.24□□□□□ -1.73
RTL9Q8NET4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.24□□□□□ -1.73
RTL9Q8NET4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.24□□□□□ -1.73
RTL9Q8NET4 MIR5680-201ENST00000577577 84 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 MIR4276-201ENST00000584832 70 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 AC020914.4-201ENST00000597690 277 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 CKS1BP3-201ENST00000600888 237 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 AC022149.2-201ENST00000621061 203 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 MIR6852-201ENST00000621699 66 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RTL9Q8NET4 AC068647.1-201ENST00000489539 2265 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 AL353743.1-202ENST00000431724 1695 ntBASIC4.24□□□□□ -1.73
RTL9Q8NET4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
RTL9Q8NET4 Z83843.1-201ENST00000604070 3685 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 DDX6P1-205ENST00000441966 1436 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RTL9Q8NET4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 OTUD4P1-201ENST00000237841 3067 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 AL034403.1-201ENST00000399414 885 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.23□□□□□ -1.73
RTL9Q8NET4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.23□□□□□ -1.73
RTL9Q8NET4 RPS6P12-201ENST00000432491 726 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 SKP1P1-201ENST00000438081 489 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 RPS4XP2-201ENST00000458402 793 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 AC112198.1-201ENST00000505369 1220 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 RPL23AP94-201ENST00000512518 302 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 AC018797.3-201ENST00000513388 1241 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.23□□□□□ -1.73
RTL9Q8NET4 MIR5004-201ENST00000579078 107 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 AC015802.5-201ENST00000607478 399 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 AC135507.2-201ENST00000612443 309 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.23□□□□□ -1.73
RTL9Q8NET4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
RTL9Q8NET4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RTL9Q8NET4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTL9Q8NET4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 CR381670.1-201ENST00000624291 1693 ntBASIC4.22□□□□□ -1.73
RTL9Q8NET4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTL9Q8NET4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTL9Q8NET4 MIR365B-201ENST00000362317 111 ntBASIC4.22□□□□□ -1.73
RTL9Q8NET4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 RPL7P28-201ENST00000437739 740 ntBASIC4.22□□□□□ -1.73
RTL9Q8NET4 MTND6P5-201ENST00000448266 512 ntBASIC4.22□□□□□ -1.73
RTL9Q8NET4 RPL37P3-201ENST00000456825 293 ntBASIC4.22□□□□□ -1.73
RTL9Q8NET4 AC090136.1-201ENST00000520009 240 ntBASIC4.22□□□□□ -1.73
RTL9Q8NET4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RTL9Q8NET4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 AC099489.2-201ENST00000574976 260 ntBASIC4.22□□□□□ -1.73
RTL9Q8NET4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTL9Q8NET4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
RTL9Q8NET4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.22□□□□□ -1.73
RTL9Q8NET4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTL9Q8NET4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTL9Q8NET4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTL9Q8NET4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RTL9Q8NET4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RTL9Q8NET4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
RTL9Q8NET4 RNA5SP197-201ENST00000363357 119 ntBASIC4.21□□□□□ -1.74
RTL9Q8NET4 RNU6-178P-201ENST00000384631 104 ntBASIC4.21□□□□□ -1.74
RTL9Q8NET4 AC093719.1-202ENST00000392735 373 ntBASIC4.21□□□□□ -1.74
RTL9Q8NET4 UBA52P6-201ENST00000399822 382 ntBASIC4.21□□□□□ -1.74
RTL9Q8NET4 MIR1289-1-201ENST00000408836 144 ntBASIC4.21□□□□□ -1.74
RTL9Q8NET4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.21□□□□□ -1.74
RTL9Q8NET4 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms