Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL139128.1-201ENST00000413921 941 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AL590806.1-201ENST00000415818 853 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 P2RY10P2-201ENST00000416730 913 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AL139095.3-201ENST00000419672 1203 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 CENPIP1-201ENST00000425713 902 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MTND1P4-201ENST00000435196 415 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 GTF2IP7-202ENST00000436677 309 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MTCYBP34-201ENST00000439552 670 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 UBE2V1P3-201ENST00000439651 417 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 BMI1P1-201ENST00000445879 941 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 DDX39BP2-208ENST00000453923 258 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC068724.1-201ENST00000487100 792 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AL024509.2-201ENST00000493462 493 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 RPS6P4-201ENST00000494693 758 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 HIGD1AP10-201ENST00000527837 282 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 UBE2NP1-201ENST00000545592 458 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AL121766.1-201ENST00000547436 487 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 ATP5F1P7-201ENST00000567330 760 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MIR3912-201ENST00000577566 105 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 WISP1-OT1-201ENST00000602893 642 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC073648.5-201ENST00000603502 305 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AL136363.2-201ENST00000604173 851 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC068944.2-201ENST00000610373 403 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 Mico1.1-201ENST00000611698 204 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MIR6780A-201ENST00000615089 68 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC018755.4-201ENST00000619715 454 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AL590240.3-201ENST00000621416 943 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC074140.1-201ENST00000621617 208 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AP001784.1-201ENST00000624107 428 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC006065.6-201ENST00000625201 545 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC092192.1-201ENST00000633154 1018 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 AC055839.1-201ENST00000634467 498 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MAPK10-304ENST00000641341 3984 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 MAPK10-349ENST00000641767 3661 ntBASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF549Q6P9A3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC017104.4-201ENST00000636283 1592 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 METTL21EP-201ENST00000298105 713 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 Y_RNA.3-201ENST00000362331 103 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 RNA5SP307-201ENST00000362863 116 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 SNORA26.8-201ENST00000391306 124 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AL035419.1-201ENST00000397037 564 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AL078604.1-201ENST00000404609 466 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC002524.1-201ENST00000411687 547 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 PAICSP7-201ENST00000419829 962 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC093084.1-201ENST00000424233 687 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 RPL23AP25-201ENST00000430973 463 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC006466.1-201ENST00000438721 289 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AL591503.2-201ENST00000442314 1005 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC093899.1-201ENST00000457984 376 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 SRRM1P2-201ENST00000464531 1192 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 RN7SL354P-201ENST00000469282 294 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 Y_RNA.695-201ENST00000516715 107 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 IGLV3-26-201ENST00000520756 302 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms