Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 RNU1-18P-201ENST00000363062 164 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 RPL37P4-201ENST00000448908 268 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC022795.1-201ENST00000473808 480 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AP000926.4-201ENST00000527351 454 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AC103881.1-201ENST00000603476 538 ntBASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
VPS13DQ5THJ4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 SETP15-201ENST00000412724 337 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC012065.2-201ENST00000421295 375 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 ELOCP18-201ENST00000434209 337 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC103783.1-201ENST00000520506 373 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC106785.3-201ENST00000564064 847 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC112198.2-201ENST00000426589 6996 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 RNU1-140P-201ENST00000365040 165 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 RPS12P18-201ENST00000442381 270 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC010655.1-201ENST00000449336 292 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AP000916.1-201ENST00000533869 835 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AL121594.4-201ENST00000556211 1196 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 YES1-203ENST00000577961 4554 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC005332.5-201ENST00000591222 2919 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AP002088.1-201ENST00000382740 395 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 RPL32P28-201ENST00000443577 397 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 RPS6P2-201ENST00000454208 705 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 HMGB1P3-201ENST00000502802 616 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AL590240.3-201ENST00000621416 943 ntBASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC2.18□□□□□ -2.06
VPS13DQ5THJ4 AC018555.1-201ENST00000567548 1980 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AP002512.4-202ENST00000641599 4530 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 GNG5P1-201ENST00000255500 204 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 SNORA48.8-201ENST00000391324 134 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 RNA5SP356-201ENST00000515972 94 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 UBL5P2-201ENST00000583788 219 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AC018692.3-201ENST00000623929 123 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 SRP72P2-201ENST00000344851 1979 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AC006971.1-201ENST00000407916 4486 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 NPM1P13-201ENST00000452663 865 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 RNU6-237P-201ENST00000515985 71 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 RIOK3P1-201ENST00000418778 1528 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 AC105272.1-201ENST00000438604 198 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 MTND2P25-201ENST00000449028 610 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 RN7SL93P-201ENST00000463035 293 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 BTF3L4P4-201ENST00000506381 449 ntBASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS13DQ5THJ4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms