Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.41□□□□□ -1.54
YBX1P67809 AC020633.1-201ENST00000468439 2247 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.4□□□□□ -1.54
YBX1P67809 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.4□□□□□ -1.54
YBX1P67809 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.54
YBX1P67809 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.4□□□□□ -1.54
YBX1P67809 AP005435.3-201ENST00000531260 3198 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.4□□□□□ -1.54
YBX1P67809 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
YBX1P67809 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
YBX1P67809 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.4□□□□□ -1.54
YBX1P67809 MIR133A2-201ENST00000347538 102 ntBASIC5.4□□□□□ -1.54
YBX1P67809 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
YBX1P67809 SNORA70.6-201ENST00000383934 134 ntBASIC5.4□□□□□ -1.54
YBX1P67809 MIR143-201ENST00000385300 106 ntBASIC5.4□□□□□ -1.54
YBX1P67809 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
YBX1P67809 RPL11P3-201ENST00000395256 523 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AL356432.1-201ENST00000405809 419 ntBASIC5.4□□□□□ -1.54
YBX1P67809 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.4□□□□□ -1.54
YBX1P67809 NME1P1-201ENST00000420914 382 ntBASIC5.4□□□□□ -1.54
YBX1P67809 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AL133173.1-201ENST00000423458 397 ntBASIC5.4□□□□□ -1.54
YBX1P67809 OR10T1P-201ENST00000424327 947 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.4□□□□□ -1.54
YBX1P67809 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.4□□□□□ -1.54
YBX1P67809 AC018644.1-201ENST00000429934 551 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.4□□□□□ -1.54
YBX1P67809 NDUFB4P8-201ENST00000435351 367 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC012075.1-201ENST00000436549 580 ntBASIC5.4□□□□□ -1.54
YBX1P67809 LSM1P1-201ENST00000438629 273 ntBASIC5.4□□□□□ -1.54
YBX1P67809 MTCYBP6-201ENST00000441810 138 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC019185.1-201ENST00000442718 389 ntBASIC5.4□□□□□ -1.54
YBX1P67809 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.4□□□□□ -1.54
YBX1P67809 AC073909.1-201ENST00000447112 999 ntBASIC5.4□□□□□ -1.54
YBX1P67809 RPL23AP20-201ENST00000447965 421 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AL450023.1-201ENST00000450868 751 ntBASIC5.4□□□□□ -1.54
YBX1P67809 RN7SL717P-201ENST00000478343 297 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC096576.1-201ENST00000489014 359 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.4□□□□□ -1.54
YBX1P67809 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.4□□□□□ -1.54
YBX1P67809 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.4□□□□□ -1.54
YBX1P67809 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.4□□□□□ -1.54
YBX1P67809 AC022690.1-201ENST00000526681 550 ntBASIC5.4□□□□□ -1.54
YBX1P67809 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.4□□□□□ -1.54
YBX1P67809 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.4□□□□□ -1.54
YBX1P67809 AC008127.2-201ENST00000549925 1075 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC007424.1-203ENST00000554613 687 ntBASIC5.4□□□□□ -1.54
YBX1P67809 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.4□□□□□ -1.54
YBX1P67809 AC093519.1-201ENST00000566109 298 ntBASIC5.4□□□□□ -1.54
YBX1P67809 MRPS21P7-201ENST00000566937 238 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC5.4□□□□□ -1.54
YBX1P67809 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.4□□□□□ -1.54
YBX1P67809 AC025574.2-201ENST00000615621 514 ntBASIC5.4□□□□□ -1.54
YBX1P67809 DLEU1_2.1-201ENST00000617920 342 ntBASIC5.4□□□□□ -1.54
YBX1P67809 AC239868.2-201ENST00000564237 4527 ntBASIC5.4□□□□□ -1.55
YBX1P67809 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
YBX1P67809 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
YBX1P67809 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
YBX1P67809 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
YBX1P67809 AL442128.2-201ENST00000620246 1824 ntBASIC5.39□□□□□ -1.55
YBX1P67809 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 AC068870.3-201ENST00000625077 2536 ntBASIC5.39□□□□□ -1.55
YBX1P67809 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
YBX1P67809 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
YBX1P67809 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 SNORA16A-201ENST00000384342 137 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AL390316.1-201ENST00000406279 553 ntBASIC5.39□□□□□ -1.55
YBX1P67809 MIR1178-201ENST00000408396 91 ntBASIC5.39□□□□□ -1.55
YBX1P67809 RNU6-908P-201ENST00000410160 94 ntBASIC5.39□□□□□ -1.55
YBX1P67809 RN7SKP286-201ENST00000410894 299 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC092634.6-201ENST00000418558 192 ntBASIC5.39□□□□□ -1.55
YBX1P67809 PDCL2P1-201ENST00000419302 352 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 AL353729.1-201ENST00000425044 720 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC113412.1-201ENST00000425840 504 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AL121776.1-201ENST00000429337 372 ntBASIC5.39□□□□□ -1.55
YBX1P67809 RPL31P35-201ENST00000431058 377 ntBASIC5.39□□□□□ -1.55
YBX1P67809 GTF2IP20-201ENST00000431663 360 ntBASIC5.39□□□□□ -1.55
YBX1P67809 RPL7P54-201ENST00000438336 674 ntBASIC5.39□□□□□ -1.55
YBX1P67809 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.39□□□□□ -1.55
YBX1P67809 RPL23AP16-201ENST00000441715 421 ntBASIC5.39□□□□□ -1.55
YBX1P67809 USP9YP15-201ENST00000442391 422 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.39□□□□□ -1.55
YBX1P67809 AC023141.9-201ENST00000458734 412 ntBASIC5.39□□□□□ -1.55
YBX1P67809 RN7SL610P-201ENST00000463845 291 ntBASIC5.39□□□□□ -1.55
YBX1P67809 RPS27P23-201ENST00000487608 251 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AL136038.1-201ENST00000497246 351 ntBASIC5.39□□□□□ -1.55
YBX1P67809 GLUD1P3-202ENST00000508551 200 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC093809.1-201ENST00000509155 340 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 MTND6P2-201ENST00000512226 524 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC027309.2-201ENST00000520566 192 ntBASIC5.39□□□□□ -1.55
YBX1P67809 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.39□□□□□ -1.55
YBX1P67809 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.39□□□□□ -1.55
YBX1P67809 AC243972.3-201ENST00000539655 198 ntBASIC5.39□□□□□ -1.55
YBX1P67809 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms