Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL606834.3-201ENST00000602615 496 ntBASIC4.29□□□□□ -1.72
LHX1P48742 AL606490.9-201ENST00000603331 271 ntBASIC4.29□□□□□ -1.72
LHX1P48742 Z82195.1-201ENST00000604558 398 ntBASIC4.29□□□□□ -1.72
LHX1P48742 AL121652.1-201ENST00000608851 448 ntBASIC4.29□□□□□ -1.72
LHX1P48742 MIR6875-201ENST00000617506 72 ntBASIC4.29□□□□□ -1.72
LHX1P48742 BX649567.1-201ENST00000642071 1134 ntBASIC4.29□□□□□ -1.72
LHX1P48742 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LHX1P48742 CYP1D1P-201ENST00000416662 1433 ntBASIC4.29□□□□□ -1.72
LHX1P48742 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.29□□□□□ -1.72
LHX1P48742 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.29□□□□□ -1.72
LHX1P48742 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.28□□□□□ -1.72
LHX1P48742 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
LHX1P48742 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 RNA5SP388-201ENST00000362584 119 ntBASIC4.28□□□□□ -1.72
LHX1P48742 RN7SKP280-201ENST00000364196 304 ntBASIC4.28□□□□□ -1.72
LHX1P48742 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.28□□□□□ -1.72
LHX1P48742 RNU6-549P-201ENST00000384433 107 ntBASIC4.28□□□□□ -1.72
LHX1P48742 MCTS2P-201ENST00000394552 546 ntBASIC4.28□□□□□ -1.72
LHX1P48742 MIR1251-201ENST00000408552 70 ntBASIC4.28□□□□□ -1.72
LHX1P48742 RNA5SP146-201ENST00000410743 123 ntBASIC4.28□□□□□ -1.72
LHX1P48742 AC073136.2-201ENST00000417282 849 ntBASIC4.28□□□□□ -1.72
LHX1P48742 RPS12P5-201ENST00000423449 371 ntBASIC4.28□□□□□ -1.72
LHX1P48742 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.28□□□□□ -1.72
LHX1P48742 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.28□□□□□ -1.72
LHX1P48742 RPS26P40-201ENST00000435209 294 ntBASIC4.28□□□□□ -1.72
LHX1P48742 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.28□□□□□ -1.72
LHX1P48742 MTND1P33-201ENST00000446251 917 ntBASIC4.28□□□□□ -1.72
LHX1P48742 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.28□□□□□ -1.72
LHX1P48742 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.28□□□□□ -1.72
LHX1P48742 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.28□□□□□ -1.72
LHX1P48742 RN7SL132P-201ENST00000478131 296 ntBASIC4.28□□□□□ -1.72
LHX1P48742 PRELID3BP6-201ENST00000503839 571 ntBASIC4.28□□□□□ -1.72
LHX1P48742 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
LHX1P48742 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 SCARNA1-201ENST00000517138 166 ntBASIC4.28□□□□□ -1.72
LHX1P48742 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.28□□□□□ -1.72
LHX1P48742 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.28□□□□□ -1.72
LHX1P48742 OR4U1P-201ENST00000554958 912 ntBASIC4.28□□□□□ -1.72
LHX1P48742 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.28□□□□□ -1.72
LHX1P48742 AL022067.1-201ENST00000602426 454 ntBASIC4.28□□□□□ -1.72
LHX1P48742 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.28□□□□□ -1.72
LHX1P48742 AC099676.1-201ENST00000608886 657 ntBASIC4.28□□□□□ -1.72
LHX1P48742 VN1R74P-201ENST00000613259 503 ntBASIC4.28□□□□□ -1.72
LHX1P48742 AC084824.4-201ENST00000620106 731 ntBASIC4.28□□□□□ -1.72
LHX1P48742 MIR6500-201ENST00000622700 86 ntBASIC4.28□□□□□ -1.72
LHX1P48742 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.28□□□□□ -1.72
LHX1P48742 AC067931.1-201ENST00000624190 671 ntBASIC4.28□□□□□ -1.72
LHX1P48742 AC010608.3-201ENST00000625048 527 ntBASIC4.28□□□□□ -1.72
LHX1P48742 MARK2P15-201ENST00000432204 2186 ntBASIC4.28□□□□□ -1.72
LHX1P48742 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 AC087190.4-201ENST00000574616 8334 ntBASIC4.28□□□□□ -1.72
LHX1P48742 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LHX1P48742 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
LHX1P48742 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LHX1P48742 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.27□□□□□ -1.73
LHX1P48742 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.27□□□□□ -1.73
LHX1P48742 LIPT1P1-201ENST00000415870 1186 ntBASIC4.27□□□□□ -1.73
LHX1P48742 RPL17P36-201ENST00000420302 549 ntBASIC4.27□□□□□ -1.73
LHX1P48742 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.27□□□□□ -1.73
LHX1P48742 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.27□□□□□ -1.73
LHX1P48742 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.27□□□□□ -1.73
LHX1P48742 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.27□□□□□ -1.73
LHX1P48742 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.27□□□□□ -1.73
LHX1P48742 RPS11P1-201ENST00000451072 473 ntBASIC4.27□□□□□ -1.73
LHX1P48742 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.27□□□□□ -1.73
LHX1P48742 APOOP2-201ENST00000461561 539 ntBASIC4.27□□□□□ -1.73
LHX1P48742 RPL30P11-201ENST00000495304 339 ntBASIC4.27□□□□□ -1.73
LHX1P48742 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.27□□□□□ -1.73
LHX1P48742 HMGB3P13-201ENST00000511263 607 ntBASIC4.27□□□□□ -1.73
LHX1P48742 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.27□□□□□ -1.73
LHX1P48742 OR4A2P-201ENST00000527276 913 ntBASIC4.27□□□□□ -1.73
LHX1P48742 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.27□□□□□ -1.73
LHX1P48742 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.27□□□□□ -1.73
LHX1P48742 AC022968.1-201ENST00000567372 442 ntBASIC4.27□□□□□ -1.73
LHX1P48742 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.27□□□□□ -1.73
LHX1P48742 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.27□□□□□ -1.73
LHX1P48742 AC022960.3-201ENST00000619794 441 ntBASIC4.27□□□□□ -1.73
LHX1P48742 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.27□□□□□ -1.73
LHX1P48742 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LHX1P48742 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 ASNSP1-201ENST00000518311 1939 ntBASIC4.27□□□□□ -1.73
LHX1P48742 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
LHX1P48742 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
LHX1P48742 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LHX1P48742 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.26□□□□□ -1.73
LHX1P48742 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms