Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AL022322.2-201ENST00000624072 20397 ntBASIC4.12□□□□□ -1.75
SCN4AP35499 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN4AP35499 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN4AP35499 AC099563.1-201ENST00000456086 418 ntBASIC4.12□□□□□ -1.75
SCN4AP35499 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.12□□□□□ -1.75
SCN4AP35499 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN4AP35499 AC009464.1-201ENST00000615731 469 ntBASIC4.12□□□□□ -1.75
SCN4AP35499 AL590240.3-201ENST00000621416 943 ntBASIC4.12□□□□□ -1.75
SCN4AP35499 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN4AP35499 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCN4AP35499 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCN4AP35499 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN4AP35499 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCN4AP35499 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCN4AP35499 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.12□□□□□ -1.75
SCN4AP35499 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.11□□□□□ -1.75
SCN4AP35499 MTHFD2P2-201ENST00000407725 247 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AL353678.1-201ENST00000422735 741 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AC005002.1-201ENST00000447458 540 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AC010486.1-201ENST00000511793 424 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN4AP35499 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN4AP35499 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN4AP35499 AL121603.1-201ENST00000553815 142 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN4AP35499 ATP5A1P2-202ENST00000616464 443 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN4AP35499 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN4AP35499 PROS2P-201ENST00000474651 1951 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN4AP35499 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SCN4AP35499 AC015813.6-201ENST00000624409 5808 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN4AP35499 HMGN1P24-201ENST00000412282 298 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 RPL7P38-201ENST00000488396 739 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AC112184.1-201ENST00000505179 312 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.11□□□□□ -1.75
SCN4AP35499 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.11□□□□□ -1.75
SCN4AP35499 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.11□□□□□ -1.75
SCN4AP35499 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.11□□□□□ -1.75
SCN4AP35499 Z82195.1-201ENST00000604558 398 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AC010809.3-201ENST00000621310 641 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SCN4AP35499 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCN4AP35499 AL031985.3-201ENST00000565390 2449 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 AL022311.1-201ENST00000623726 19416 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SCN4AP35499 TNPO1P3-201ENST00000436471 2662 ntBASIC4.11□□□□□ -1.75
SCN4AP35499 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCN4AP35499 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SCN4AP35499 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 FTLP6-201ENST00000355274 422 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 SNORA48.8-201ENST00000391324 134 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 RSL24D1P1-201ENST00000404972 493 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 Z98941.1-201ENST00000407764 100 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 AC063979.1-201ENST00000415539 377 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 RPL23AP69-201ENST00000431134 458 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN4AP35499 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN4AP35499 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.1□□□□□ -1.75
SCN4AP35499 MIR3162-201ENST00000581818 82 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
SCN4AP35499 NR1H5P-201ENST00000452683 1377 ntBASIC4.1□□□□□ -1.75
SCN4AP35499 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SCN4AP35499 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCN4AP35499 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SCN4AP35499 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
SCN4AP35499 AC027287.1-201ENST00000553115 1453 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCN4AP35499 MIR449A-201ENST00000362113 91 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 AL138885.1-201ENST00000405921 675 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN4AP35499 BX890604.2-201ENST00000427883 474 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN4AP35499 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN4AP35499 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN4AP35499 AC018442.3-201ENST00000523025 183 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.09□□□□□ -1.75
SCN4AP35499 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.09□□□□□ -1.75
SCN4AP35499 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.09□□□□□ -1.75
SCN4AP35499 EIF1P6-201ENST00000600054 334 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 AC128687.2-201ENST00000609657 566 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN4AP35499 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCN4AP35499 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SCN4AP35499 AC005183.1-201ENST00000603687 1979 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 HSPA8P19-201ENST00000505359 1517 ntBASIC4.09□□□□□ -1.75
SCN4AP35499 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.09□□□□□ -1.76
SCN4AP35499 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms