Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.76□□□□□ -1.81
RORAP35398 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.76□□□□□ -1.81
RORAP35398 PCNAP1-202ENST00000595299 752 ntBASIC3.76□□□□□ -1.81
RORAP35398 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.76□□□□□ -1.81
RORAP35398 AC091167.4-201ENST00000605079 184 ntBASIC3.76□□□□□ -1.81
RORAP35398 AL034351.1-201ENST00000605288 668 ntBASIC3.76□□□□□ -1.81
RORAP35398 AL355802.4-201ENST00000607635 548 ntBASIC3.76□□□□□ -1.81
RORAP35398 AP004607.9-201ENST00000618202 316 ntBASIC3.76□□□□□ -1.81
RORAP35398 MAPK10-372ENST00000641954 3413 ntBASIC3.76□□□□□ -1.81
RORAP35398 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RORAP35398 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RORAP35398 USP8P1-201ENST00000494673 3183 ntBASIC3.75□□□□□ -1.81
RORAP35398 NMD3P1-201ENST00000439704 1488 ntBASIC3.75□□□□□ -1.81
RORAP35398 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
RORAP35398 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RORAP35398 SNORA62.3-201ENST00000365110 153 ntBASIC3.75□□□□□ -1.81
RORAP35398 SNORD6-201ENST00000365444 73 ntBASIC3.75□□□□□ -1.81
RORAP35398 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.75□□□□□ -1.81
RORAP35398 RNU4-31P-201ENST00000384211 141 ntBASIC3.75□□□□□ -1.81
RORAP35398 RNU6-452P-201ENST00000384406 107 ntBASIC3.75□□□□□ -1.81
RORAP35398 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.75□□□□□ -1.81
RORAP35398 NPM1P34-201ENST00000428821 893 ntBASIC3.75□□□□□ -1.81
RORAP35398 AC018644.1-201ENST00000429934 551 ntBASIC3.75□□□□□ -1.81
RORAP35398 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.75□□□□□ -1.81
RORAP35398 AC083863.1-201ENST00000438811 231 ntBASIC3.75□□□□□ -1.81
RORAP35398 AL138799.3-201ENST00000438968 350 ntBASIC3.75□□□□□ -1.81
RORAP35398 MED6P1-201ENST00000439659 713 ntBASIC3.75□□□□□ -1.81
RORAP35398 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.75□□□□□ -1.81
RORAP35398 AL500522.2-201ENST00000448562 343 ntBASIC3.75□□□□□ -1.81
RORAP35398 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.75□□□□□ -1.81
RORAP35398 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.75□□□□□ -1.81
RORAP35398 RPS20P32-201ENST00000456044 356 ntBASIC3.75□□□□□ -1.81
RORAP35398 HMGN2P7-201ENST00000456186 273 ntBASIC3.75□□□□□ -1.81
RORAP35398 PPIAP15-201ENST00000479662 484 ntBASIC3.75□□□□□ -1.81
RORAP35398 AC092451.1-201ENST00000480211 153 ntBASIC3.75□□□□□ -1.81
RORAP35398 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
RORAP35398 AP001086.1-201ENST00000494882 321 ntBASIC3.75□□□□□ -1.81
RORAP35398 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
RORAP35398 AC110792.2-201ENST00000510278 224 ntBASIC3.75□□□□□ -1.81
RORAP35398 RNU6-362P-201ENST00000516736 90 ntBASIC3.75□□□□□ -1.81
RORAP35398 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.75□□□□□ -1.81
RORAP35398 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.75□□□□□ -1.81
RORAP35398 HAUS1P3-201ENST00000523909 662 ntBASIC3.75□□□□□ -1.81
RORAP35398 NOP56P3-201ENST00000549457 385 ntBASIC3.75□□□□□ -1.81
RORAP35398 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.75□□□□□ -1.81
RORAP35398 MIR4444-1-201ENST00000581696 74 ntBASIC3.75□□□□□ -1.81
RORAP35398 MIR4444-2-201ENST00000584390 74 ntBASIC3.75□□□□□ -1.81
RORAP35398 MIR92B-201ENST00000607575 96 ntBASIC3.75□□□□□ -1.81
RORAP35398 AL139089.1-201ENST00000620372 975 ntBASIC3.75□□□□□ -1.81
RORAP35398 FP236240.3-201ENST00000623061 327 ntBASIC3.75□□□□□ -1.81
RORAP35398 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RORAP35398 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RORAP35398 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RORAP35398 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.75□□□□□ -1.81
RORAP35398 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
RORAP35398 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RORAP35398 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 PTMAP2-201ENST00000397627 327 ntBASIC3.74□□□□□ -1.81
RORAP35398 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 SNORA3C-201ENST00000408792 125 ntBASIC3.74□□□□□ -1.81
RORAP35398 RNU4-74P-201ENST00000411280 161 ntBASIC3.74□□□□□ -1.81
RORAP35398 AL035246.1-201ENST00000433554 1255 ntBASIC3.74□□□□□ -1.81
RORAP35398 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.74□□□□□ -1.81
RORAP35398 AF228730.2-201ENST00000438784 848 ntBASIC3.74□□□□□ -1.81
RORAP35398 RPS7P5-201ENST00000441482 581 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.74□□□□□ -1.81
RORAP35398 AL133547.1-201ENST00000448546 220 ntBASIC3.74□□□□□ -1.81
RORAP35398 AL513343.1-201ENST00000451818 792 ntBASIC3.74□□□□□ -1.81
RORAP35398 RPS20P21-201ENST00000466859 343 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.74□□□□□ -1.81
RORAP35398 RN7SL323P-201ENST00000494712 295 ntBASIC3.74□□□□□ -1.81
RORAP35398 TRAV31-201ENST00000502780 342 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC025554.1-201ENST00000505641 188 ntBASIC3.74□□□□□ -1.81
RORAP35398 RN7SKP141-201ENST00000516167 338 ntBASIC3.74□□□□□ -1.81
RORAP35398 RNU6-352P-201ENST00000516908 107 ntBASIC3.74□□□□□ -1.81
RORAP35398 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.74□□□□□ -1.81
RORAP35398 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 CYCSP30-201ENST00000546447 172 ntBASIC3.74□□□□□ -1.81
RORAP35398 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.74□□□□□ -1.81
RORAP35398 AC007687.1-201ENST00000602704 304 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC069304.3-201ENST00000603938 1084 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC112230.1-201ENST00000604342 547 ntBASIC3.74□□□□□ -1.81
RORAP35398 RNA5SP108-201ENST00000605921 117 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC100814.1-201ENST00000606963 623 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.74□□□□□ -1.81
RORAP35398 AC110792.4-201ENST00000609843 298 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC012531.5-201ENST00000611375 151 ntBASIC3.74□□□□□ -1.81
RORAP35398 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RORAP35398 AC121761.2-201ENST00000617300 689 ntBASIC3.74□□□□□ -1.81
RORAP35398 AC112200.1-201ENST00000625015 234 ntBASIC3.74□□□□□ -1.81
RORAP35398 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.74□□□□□ -1.81
RORAP35398 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms