Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 AC000123.2-201ENST00000623124 461 ntBASIC4.58□□□□□ -1.68
RFC4P35249 AC079298.2-201ENST00000623885 459 ntBASIC4.58□□□□□ -1.68
RFC4P35249 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 SPATA2P1-201ENST00000431223 2055 ntBASIC4.58□□□□□ -1.68
RFC4P35249 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFC4P35249 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC4P35249 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC4P35249 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC4P35249 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RFC4P35249 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.57□□□□□ -1.68
RFC4P35249 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC4P35249 AL512649.1-201ENST00000428997 581 ntBASIC4.57□□□□□ -1.68
RFC4P35249 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC4P35249 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC4P35249 RPL31P20-201ENST00000449593 360 ntBASIC4.57□□□□□ -1.68
RFC4P35249 RPL7P31-201ENST00000450192 724 ntBASIC4.57□□□□□ -1.68
RFC4P35249 S100A11P1-201ENST00000477525 312 ntBASIC4.57□□□□□ -1.68
RFC4P35249 AC147055.1-201ENST00000509261 750 ntBASIC4.57□□□□□ -1.68
RFC4P35249 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC4P35249 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC4P35249 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC4P35249 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RFC4P35249 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.57□□□□□ -1.68
RFC4P35249 MIR4512-201ENST00000583257 77 ntBASIC4.57□□□□□ -1.68
RFC4P35249 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
RFC4P35249 AC135507.2-201ENST00000612443 309 ntBASIC4.57□□□□□ -1.68
RFC4P35249 MIR7112-201ENST00000616126 65 ntBASIC4.57□□□□□ -1.68
RFC4P35249 AC107905.1-201ENST00000616204 426 ntBASIC4.57□□□□□ -1.68
RFC4P35249 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.57□□□□□ -1.68
RFC4P35249 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RFC4P35249 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC4P35249 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RFC4P35249 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.57□□□□□ -1.68
RFC4P35249 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC4P35249 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC4P35249 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC4P35249 AL118496.1-201ENST00000440201 1812 ntBASIC4.56□□□□□ -1.68
RFC4P35249 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC4P35249 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC4P35249 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RFC4P35249 SNORD17-201ENST00000390930 237 ntBASIC4.56□□□□□ -1.68
RFC4P35249 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.56□□□□□ -1.68
RFC4P35249 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFC4P35249 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.56□□□□□ -1.68
RFC4P35249 NDUFS5P3-201ENST00000450668 321 ntBASIC4.56□□□□□ -1.68
RFC4P35249 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC4P35249 AC005912.1-201ENST00000495392 255 ntBASIC4.56□□□□□ -1.68
RFC4P35249 FTH1P24-201ENST00000503502 462 ntBASIC4.56□□□□□ -1.68
RFC4P35249 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.56□□□□□ -1.68
RFC4P35249 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.56□□□□□ -1.68
RFC4P35249 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC4P35249 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC4P35249 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC4P35249 AL590410.1-201ENST00000617925 333 ntBASIC4.56□□□□□ -1.68
RFC4P35249 MIR6852-201ENST00000621699 66 ntBASIC4.56□□□□□ -1.68
RFC4P35249 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.56□□□□□ -1.68
RFC4P35249 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RFC4P35249 UBE3AP2-201ENST00000429033 2259 ntBASIC4.56□□□□□ -1.68
RFC4P35249 LINC02471-203ENST00000641941 4752 ntBASIC4.55□□□□□ -1.68
RFC4P35249 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RFC4P35249 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC4P35249 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC4P35249 RNA5SP52-201ENST00000362448 134 ntBASIC4.55□□□□□ -1.68
RFC4P35249 U3.26-201ENST00000391236 204 ntBASIC4.55□□□□□ -1.68
RFC4P35249 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AL121834.1-202ENST00000404494 277 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC4P35249 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC4P35249 HIGD1AP12-201ENST00000427832 281 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AL392003.1-201ENST00000434394 243 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AC096638.2-201ENST00000434965 711 ntBASIC4.55□□□□□ -1.68
RFC4P35249 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC4P35249 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC4P35249 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.55□□□□□ -1.68
RFC4P35249 OR5M7P-201ENST00000526140 972 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC4P35249 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC4P35249 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC4P35249 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.55□□□□□ -1.68
RFC4P35249 MIR4513-201ENST00000581077 86 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.55□□□□□ -1.68
RFC4P35249 FAM60CP-201ENST00000591086 664 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AL049844.2-201ENST00000604280 628 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AC128687.2-201ENST00000609657 566 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.55□□□□□ -1.68
RFC4P35249 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RFC4P35249 AC007529.1-201ENST00000418574 2178 ntBASIC4.55□□□□□ -1.68
RFC4P35249 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RFC4P35249 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RFC4P35249 PNPT1P2-201ENST00000456768 2050 ntBASIC4.54□□□□□ -1.68
RFC4P35249 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
RFC4P35249 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
RFC4P35249 RPL31P52-201ENST00000407532 367 ntBASIC4.54□□□□□ -1.68
RFC4P35249 BX323014.1-201ENST00000412876 237 ntBASIC4.54□□□□□ -1.68
RFC4P35249 AL691447.1-201ENST00000419456 387 ntBASIC4.54□□□□□ -1.68
RFC4P35249 EIF4EP1-201ENST00000422311 642 ntBASIC4.54□□□□□ -1.68
RFC4P35249 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms