Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.39□□□□□ -1.71
HOXD10P28358 AC106782.4-201ENST00000568264 210 ntBASIC4.39□□□□□ -1.71
HOXD10P28358 AP001180.3-201ENST00000582221 145 ntBASIC4.39□□□□□ -1.71
HOXD10P28358 MIMT1-201ENST00000597105 1050 ntBASIC4.39□□□□□ -1.71
HOXD10P28358 AC010591.1-201ENST00000603941 649 ntBASIC4.39□□□□□ -1.71
HOXD10P28358 AC107308.1-201ENST00000615897 301 ntBASIC4.39□□□□□ -1.71
HOXD10P28358 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD10P28358 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HOXD10P28358 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXD10P28358 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HOXD10P28358 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD10P28358 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD10P28358 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD10P28358 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD10P28358 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD10P28358 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD10P28358 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HOXD10P28358 RNU1-15P-201ENST00000353977 144 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 SNORA3C-201ENST00000408792 125 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 ATP5A1P2-201ENST00000412323 255 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD10P28358 RPS23P10-201ENST00000416185 486 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD10P28358 MTCO1P52-201ENST00000433928 531 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC073063.1-201ENST00000434352 607 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 USP9YP7-201ENST00000436723 430 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD10P28358 USP9YP32-201ENST00000452432 430 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 CEACAMP4-201ENST00000457676 421 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 HMGB3P30-201ENST00000457863 606 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 RPL9P32-201ENST00000464118 620 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 RPL6P9-201ENST00000466502 859 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AP001086.1-201ENST00000494882 321 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 SNORA48.9-201ENST00000516419 162 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC087369.1-201ENST00000520775 996 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD10P28358 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXD10P28358 OR1AB1P-201ENST00000585564 761 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC067852.4-201ENST00000590314 478 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXD10P28358 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXD10P28358 AC103710.3-201ENST00000608157 948 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC020658.4-201ENST00000613987 684 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC124312.6-202ENST00000623624 418 ntBASIC4.38□□□□□ -1.71
HOXD10P28358 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXD10P28358 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXD10P28358 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD10P28358 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD10P28358 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HOXD10P28358 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXD10P28358 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
HOXD10P28358 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD10P28358 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD10P28358 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD10P28358 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD10P28358 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HOXD10P28358 RNU1-108P-201ENST00000362556 161 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 MIR93-201ENST00000385024 80 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD10P28358 RPL31P45-201ENST00000419532 356 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 CCRL1P1-201ENST00000449542 1053 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD10P28358 RNU7-27P-201ENST00000459281 62 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 RNA5SP154-201ENST00000516193 111 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 AC022695.1-201ENST00000522089 237 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD10P28358 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXD10P28358 AC020914.6-201ENST00000594327 272 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 AC245128.3-201ENST00000594721 748 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 RMST_5.1-201ENST00000618704 126 ntBASIC4.37□□□□□ -1.71
HOXD10P28358 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD10P28358 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD10P28358 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXD10P28358 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HOXD10P28358 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXD10P28358 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HOXD10P28358 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXD10P28358 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HOXD10P28358 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD10P28358 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD10P28358 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
HOXD10P28358 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXD10P28358 RNU6-819P-201ENST00000364116 107 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC083799.1-201ENST00000366451 910 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HOXD10P28358 MIR320B1-201ENST00000390209 79 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 SNORA48.2-201ENST00000390926 124 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXD10P28358 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD10P28358 AC004448.2-201ENST00000422360 586 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 MTCO1P45-201ENST00000431457 267 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXD10P28358 RANP8-201ENST00000444720 713 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 RPL31P20-201ENST00000449593 360 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC073387.1-201ENST00000453261 709 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 PSMC1P13-201ENST00000458195 985 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 RPL23AP12-201ENST00000467573 473 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC025445.1-201ENST00000502728 300 ntBASIC4.36□□□□□ -1.71
HOXD10P28358 AC026784.1-201ENST00000507986 352 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms