Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC090804.1-201ENST00000448870 490 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC087312.1-201ENST00000471411 480 ntBASIC6.29□□□□□ -1.4
LIG1P18858 RN7SL717P-201ENST00000478343 297 ntBASIC6.29□□□□□ -1.4
LIG1P18858 RPS3AP14-201ENST00000483907 780 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.29□□□□□ -1.4
LIG1P18858 KCTD9P5-201ENST00000504141 1170 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.29□□□□□ -1.4
LIG1P18858 AC108064.1-201ENST00000513791 460 ntBASIC6.29□□□□□ -1.4
LIG1P18858 RNU6-1153P-201ENST00000516760 105 ntBASIC6.29□□□□□ -1.4
LIG1P18858 Y_RNA.701-201ENST00000516812 110 ntBASIC6.29□□□□□ -1.4
LIG1P18858 HMGB1P23-201ENST00000518743 568 ntBASIC6.29□□□□□ -1.4
LIG1P18858 DEFB131D-201ENST00000526803 184 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.29□□□□□ -1.4
LIG1P18858 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.29□□□□□ -1.4
LIG1P18858 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.29□□□□□ -1.4
LIG1P18858 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.29□□□□□ -1.4
LIG1P18858 PRELID3BP8-201ENST00000604148 295 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC007363.1-201ENST00000604736 620 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC009233.1-201ENST00000616477 371 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC023509.5-201ENST00000617434 807 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AL445264.1-201ENST00000621719 171 ntBASIC6.29□□□□□ -1.4
LIG1P18858 AC068880.5-201ENST00000624331 290 ntBASIC6.29□□□□□ -1.4
LIG1P18858 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
LIG1P18858 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
LIG1P18858 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 AL034549.2-201ENST00000618285 3373 ntBASIC6.28□□□□□ -1.4
LIG1P18858 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 SNORA62.2-201ENST00000364672 152 ntBASIC6.28□□□□□ -1.4
LIG1P18858 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 RNA5SP241-201ENST00000391326 114 ntBASIC6.28□□□□□ -1.4
LIG1P18858 RPL31P1-201ENST00000398116 372 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AL356776.1-201ENST00000406574 447 ntBASIC6.28□□□□□ -1.4
LIG1P18858 OR6E1P-201ENST00000414424 923 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC083875.1-201ENST00000419509 405 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 AC008850.1-201ENST00000427546 362 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 AC002504.1-201ENST00000438281 691 ntBASIC6.28□□□□□ -1.4
LIG1P18858 CACYBPP1-201ENST00000438592 684 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC092809.1-201ENST00000441469 474 ntBASIC6.28□□□□□ -1.4
LIG1P18858 GAPDHP17-201ENST00000449858 1001 ntBASIC6.28□□□□□ -1.4
LIG1P18858 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 AL354710.1-201ENST00000453641 246 ntBASIC6.28□□□□□ -1.4
LIG1P18858 PMCHL2-203ENST00000457791 237 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 AC018638.3-201ENST00000461273 132 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC023598.1-201ENST00000472521 361 ntBASIC6.28□□□□□ -1.4
LIG1P18858 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 RN7SL101P-201ENST00000496350 279 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 AC018710.1-201ENST00000506509 158 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC022447.3-201ENST00000506865 495 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC117522.3-201ENST00000507974 584 ntBASIC6.28□□□□□ -1.4
LIG1P18858 KCTD9P2-201ENST00000512203 1013 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 SCARNA20.4-201ENST00000516969 131 ntBASIC6.28□□□□□ -1.4
LIG1P18858 MRPS16P1-201ENST00000523462 412 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 MTND1P35-201ENST00000526739 508 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.28□□□□□ -1.4
LIG1P18858 AC022404.1-201ENST00000555320 273 ntBASIC6.28□□□□□ -1.4
LIG1P18858 CYCSP2-201ENST00000558168 301 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC010547.6-201ENST00000571789 193 ntBASIC6.28□□□□□ -1.4
LIG1P18858 MIR4505-201ENST00000582238 73 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC090312.2-201ENST00000582687 378 ntBASIC6.28□□□□□ -1.4
LIG1P18858 MIR4660-201ENST00000583549 74 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC009977.1-201ENST00000586015 570 ntBASIC6.28□□□□□ -1.4
LIG1P18858 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 AC008115.3-201ENST00000614874 549 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC025574.2-201ENST00000615621 514 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC104010.1-201ENST00000616889 150 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
LIG1P18858 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
LIG1P18858 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.28□□□□□ -1.4
LIG1P18858 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
LIG1P18858 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.28□□□□□ -1.4
LIG1P18858 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
LIG1P18858 AC093311.1-201ENST00000506586 2021 ntBASIC6.28□□□□□ -1.4
LIG1P18858 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms