Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 SNORD91B-202ENST00000608459 222 ntBASIC3.33□□□□□ -1.88
VCANP13611 AC139713.2-215ENST00000641428 5037 ntBASIC3.33□□□□□ -1.88
VCANP13611 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.33□□□□□ -1.88
VCANP13611 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VCANP13611 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
VCANP13611 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VCANP13611 AC104581.5-201ENST00000624171 7141 ntBASIC3.33□□□□□ -1.88
VCANP13611 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.33□□□□□ -1.88
VCANP13611 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VCANP13611 AL356057.1-202ENST00000402263 756 ntBASIC3.33□□□□□ -1.88
VCANP13611 AC048351.1-201ENST00000420064 602 ntBASIC3.33□□□□□ -1.88
VCANP13611 AC022018.1-201ENST00000430685 241 ntBASIC3.33□□□□□ -1.88
VCANP13611 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.33□□□□□ -1.88
VCANP13611 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.33□□□□□ -1.88
VCANP13611 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VCANP13611 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VCANP13611 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VCANP13611 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VCANP13611 KCTD9P3-201ENST00000434597 1169 ntBASIC3.32□□□□□ -1.88
VCANP13611 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.32□□□□□ -1.88
VCANP13611 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.32□□□□□ -1.88
VCANP13611 AC006480.1-201ENST00000449887 378 ntBASIC3.32□□□□□ -1.88
VCANP13611 RPS3P1-201ENST00000456781 192 ntBASIC3.32□□□□□ -1.88
VCANP13611 AC109458.1-201ENST00000508858 316 ntBASIC3.32□□□□□ -1.88
VCANP13611 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.32□□□□□ -1.88
VCANP13611 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.32□□□□□ -1.88
VCANP13611 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.32□□□□□ -1.88
VCANP13611 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VCANP13611 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VCANP13611 SNORA3.2-201ENST00000408221 125 ntBASIC3.32□□□□□ -1.88
VCANP13611 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.32□□□□□ -1.88
VCANP13611 AC098824.1-201ENST00000453565 980 ntBASIC3.32□□□□□ -1.88
VCANP13611 OR4R3P-201ENST00000525084 838 ntBASIC3.32□□□□□ -1.88
VCANP13611 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
VCANP13611 AC025811.1-201ENST00000604312 472 ntBASIC3.32□□□□□ -1.88
VCANP13611 AC007619.2-201ENST00000605743 379 ntBASIC3.32□□□□□ -1.88
VCANP13611 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VCANP13611 AC018529.3-201ENST00000624212 2254 ntBASIC3.32□□□□□ -1.88
VCANP13611 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
VCANP13611 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VCANP13611 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VCANP13611 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VCANP13611 AL136116.1-201ENST00000403591 381 ntBASIC3.32□□□□□ -1.88
VCANP13611 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.32□□□□□ -1.88
VCANP13611 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.32□□□□□ -1.88
VCANP13611 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.32□□□□□ -1.88
VCANP13611 AC146507.2-201ENST00000460608 476 ntBASIC3.32□□□□□ -1.88
VCANP13611 AC018797.3-201ENST00000513388 1241 ntBASIC3.32□□□□□ -1.88
VCANP13611 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
VCANP13611 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.32□□□□□ -1.88
VCANP13611 OR4K7P-201ENST00000580232 945 ntBASIC3.32□□□□□ -1.88
VCANP13611 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.32□□□□□ -1.88
VCANP13611 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 AC063923.1-201ENST00000478982 1619 ntBASIC3.31□□□□□ -1.88
VCANP13611 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 CR383658.2-201ENST00000547576 1525 ntBASIC3.31□□□□□ -1.88
VCANP13611 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 RNA5SP184-201ENST00000411071 108 ntBASIC3.31□□□□□ -1.88
VCANP13611 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 AC069285.2-201ENST00000440210 275 ntBASIC3.31□□□□□ -1.88
VCANP13611 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.31□□□□□ -1.88
VCANP13611 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VCANP13611 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VCANP13611 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 AL139415.2-201ENST00000431968 163 ntBASIC3.31□□□□□ -1.88
VCANP13611 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.31□□□□□ -1.88
VCANP13611 AC034159.1-201ENST00000513885 583 ntBASIC3.31□□□□□ -1.88
VCANP13611 AC079600.2-201ENST00000550076 130 ntBASIC3.31□□□□□ -1.88
VCANP13611 TRAV15-201ENST00000556680 249 ntBASIC3.31□□□□□ -1.88
VCANP13611 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 UBE3AP2-201ENST00000429033 2259 ntBASIC3.31□□□□□ -1.88
VCANP13611 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VCANP13611 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC3.31□□□□□ -1.88
VCANP13611 RPL9P32-201ENST00000464118 620 ntBASIC3.31□□□□□ -1.88
VCANP13611 AC117440.1-201ENST00000474107 571 ntBASIC3.31□□□□□ -1.88
VCANP13611 RN7SL499P-201ENST00000481141 276 ntBASIC3.31□□□□□ -1.88
VCANP13611 FCF1P8-201ENST00000510322 597 ntBASIC3.31□□□□□ -1.88
VCANP13611 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.31□□□□□ -1.88
VCANP13611 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.31□□□□□ -1.88
VCANP13611 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.31□□□□□ -1.88
VCANP13611 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VCANP13611 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VCANP13611 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.3□□□□□ -1.88
VCANP13611 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms