Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.69□□□□□ -1.66
MMP3P08254 AC015726.3-201ENST00000624501 418 ntBASIC4.69□□□□□ -1.66
MMP3P08254 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
MMP3P08254 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
MMP3P08254 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
MMP3P08254 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.69□□□□□ -1.66
MMP3P08254 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 HSPA8P17-201ENST00000427029 1382 ntBASIC4.68□□□□□ -1.66
MMP3P08254 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP3P08254 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP3P08254 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 RNU6-1214P-201ENST00000363650 109 ntBASIC4.68□□□□□ -1.66
MMP3P08254 RNU4-92P-201ENST00000363783 136 ntBASIC4.68□□□□□ -1.66
MMP3P08254 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 RNU6-549P-201ENST00000384433 107 ntBASIC4.68□□□□□ -1.66
MMP3P08254 SNORA40.2-201ENST00000390847 128 ntBASIC4.68□□□□□ -1.66
MMP3P08254 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP3P08254 HMGB1P49-201ENST00000418882 569 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC114814.2-201ENST00000419195 485 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 AC009263.1-201ENST00000441193 1239 ntBASIC4.68□□□□□ -1.66
MMP3P08254 SETD6P1-201ENST00000444575 317 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC233982.1-201ENST00000451247 436 ntBASIC4.68□□□□□ -1.66
MMP3P08254 NECAP1P2-201ENST00000455668 727 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC079804.1-201ENST00000461922 436 ntBASIC4.68□□□□□ -1.66
MMP3P08254 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP3P08254 RNA5SP360-201ENST00000516555 118 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP3P08254 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 LSM3P2-201ENST00000551246 273 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.68□□□□□ -1.66
MMP3P08254 AC044913.1-201ENST00000557200 430 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 AP001269.3-201ENST00000588718 329 ntBASIC4.68□□□□□ -1.66
MMP3P08254 BNIP3P24-201ENST00000593398 557 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 AC093783.1-201ENST00000612976 329 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AP002782.1-201ENST00000623107 614 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
MMP3P08254 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 AC012321.1-201ENST00000561622 1588 ntBASIC4.68□□□□□ -1.66
MMP3P08254 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
MMP3P08254 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
MMP3P08254 AC104446.1-201ENST00000613728 1321 ntBASIC4.68□□□□□ -1.66
MMP3P08254 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.68□□□□□ -1.66
MMP3P08254 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.67□□□□□ -1.66
MMP3P08254 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 MAPK10-303ENST00000641324 3959 ntBASIC4.67□□□□□ -1.66
MMP3P08254 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MMP3P08254 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
MMP3P08254 RNU6-1339P-201ENST00000363574 91 ntBASIC4.67□□□□□ -1.66
MMP3P08254 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 Z75741.2-201ENST00000417272 1167 ntBASIC4.67□□□□□ -1.66
MMP3P08254 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 ELOCP9-201ENST00000418624 239 ntBASIC4.67□□□□□ -1.66
MMP3P08254 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.67□□□□□ -1.66
MMP3P08254 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.67□□□□□ -1.66
MMP3P08254 PPIAP13-201ENST00000434706 478 ntBASIC4.67□□□□□ -1.66
MMP3P08254 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.67□□□□□ -1.66
MMP3P08254 TPTE2P6-202ENST00000445572 1007 ntBASIC4.67□□□□□ -1.66
MMP3P08254 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 NPM1P39-201ENST00000449818 867 ntBASIC4.67□□□□□ -1.66
MMP3P08254 AL445433.1-201ENST00000457507 257 ntBASIC4.67□□□□□ -1.66
MMP3P08254 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.67□□□□□ -1.66
MMP3P08254 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
MMP3P08254 NPM1P41-201ENST00000512920 831 ntBASIC4.67□□□□□ -1.66
MMP3P08254 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 IFITM8P-201ENST00000522529 394 ntBASIC4.67□□□□□ -1.66
MMP3P08254 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
MMP3P08254 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.67□□□□□ -1.66
MMP3P08254 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.67□□□□□ -1.66
MMP3P08254 AC114878.2-201ENST00000604863 1251 ntBASIC4.67□□□□□ -1.66
MMP3P08254 AC096553.1-201ENST00000605169 829 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms