Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MTCYBP21-201ENST00000443300 1113 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC068587.1-201ENST00000483613 781 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC093267.1-201ENST00000489176 961 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC010460.1-201ENST00000507087 466 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 RAC1P2-201ENST00000511164 579 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 RNA5SP208-201ENST00000516156 78 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 RNA5SP164-201ENST00000516533 110 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC103833.1-201ENST00000517442 172 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 VTA1P2-201ENST00000520205 911 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AL121766.1-201ENST00000547436 487 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 SNRPGP1-201ENST00000553864 222 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 MIR4716-201ENST00000579628 84 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC022146.1-201ENST00000595307 847 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC011492.1-201ENST00000600023 315 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC015849.2-201ENST00000605738 409 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC010857.1-201ENST00000606398 594 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC017076.1-201ENST00000607613 578 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC008121.2-201ENST00000614647 523 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC123768.4-201ENST00000616244 701 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC068831.8-201ENST00000620171 435 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC073073.2-201ENST00000609827 2578 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 OR11H5P-202ENST00000641612 1325 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 RNU6-984P-201ENST00000363236 109 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 RNA5SP479-201ENST00000364858 117 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 RNU6-98P-201ENST00000384173 107 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 RNU4-31P-201ENST00000384211 141 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 TAF9BP2-201ENST00000400856 499 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 HSPD1P16-201ENST00000402302 394 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AL590704.1-201ENST00000402856 794 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 TRGV6-201ENST00000417928 299 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 RPL31P12-201ENST00000422587 358 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 FO393419.3-201ENST00000428741 282 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 SNORA71B-202ENST00000439232 272 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 HMGB3P21-201ENST00000452483 547 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 RN7SKP21-201ENST00000516503 220 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC022695.1-201ENST00000522089 237 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC084757.1-201ENST00000559987 490 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AC005255.1-201ENST00000593748 216 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AL355816.1-201ENST00000607951 118 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AL731566.2-201ENST00000618971 317 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AP006248.2-201ENST00000623309 592 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 CDRT1-208ENST00000630868 794 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
HLA-DPB1P04440 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HLA-DPB1P04440 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HLA-DPB1P04440 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms