Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 USP9YP24-201ENST00000434374 697 ntBASIC4.31□□□□□ -1.72
LDLRP01130 SETD6P1-201ENST00000444575 317 ntBASIC4.31□□□□□ -1.72
LDLRP01130 USP9YP17-201ENST00000444617 696 ntBASIC4.31□□□□□ -1.72
LDLRP01130 MTCYBP42-201ENST00000444653 1130 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 AL162591.2-201ENST00000449634 317 ntBASIC4.31□□□□□ -1.72
LDLRP01130 NDUFS5P3-201ENST00000450668 321 ntBASIC4.31□□□□□ -1.72
LDLRP01130 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.31□□□□□ -1.72
LDLRP01130 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.31□□□□□ -1.72
LDLRP01130 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.31□□□□□ -1.72
LDLRP01130 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.31□□□□□ -1.72
LDLRP01130 SNORD116-26-201ENST00000516006 96 ntBASIC4.31□□□□□ -1.72
LDLRP01130 RNU2-30P-201ENST00000516209 141 ntBASIC4.31□□□□□ -1.72
LDLRP01130 RNU6-416P-201ENST00000516265 103 ntBASIC4.31□□□□□ -1.72
LDLRP01130 snoZ278.1-201ENST00000517059 112 ntBASIC4.31□□□□□ -1.72
LDLRP01130 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 COX6B1P6-201ENST00000522347 255 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.31□□□□□ -1.72
LDLRP01130 IGJP1-201ENST00000522682 475 ntBASIC4.31□□□□□ -1.72
LDLRP01130 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.31□□□□□ -1.72
LDLRP01130 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.31□□□□□ -1.72
LDLRP01130 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.31□□□□□ -1.72
LDLRP01130 MTND4LP24-201ENST00000572277 291 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LDLRP01130 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.31□□□□□ -1.72
LDLRP01130 AP001542.2-201ENST00000593141 364 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AC022022.2-201ENST00000602989 360 ntBASIC4.31□□□□□ -1.72
LDLRP01130 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AC009318.3-201ENST00000616916 503 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AP003485.2-201ENST00000623636 610 ntBASIC4.31□□□□□ -1.72
LDLRP01130 AC092608.3-201ENST00000625017 386 ntBASIC4.31□□□□□ -1.72
LDLRP01130 MIR6715B-201ENST00000637172 77 ntBASIC4.31□□□□□ -1.72
LDLRP01130 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LDLRP01130 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.31□□□□□ -1.72
LDLRP01130 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LDLRP01130 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LDLRP01130 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.31□□□□□ -1.72
LDLRP01130 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LDLRP01130 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.31□□□□□ -1.72
LDLRP01130 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.3□□□□□ -1.72
LDLRP01130 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.3□□□□□ -1.72
LDLRP01130 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LDLRP01130 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
LDLRP01130 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LDLRP01130 RNU6-906P-201ENST00000384700 70 ntBASIC4.3□□□□□ -1.72
LDLRP01130 MIR93-201ENST00000385024 80 ntBASIC4.3□□□□□ -1.72
LDLRP01130 U3.30-201ENST00000391308 210 ntBASIC4.3□□□□□ -1.72
LDLRP01130 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 ATG4AP1-201ENST00000416893 538 ntBASIC4.3□□□□□ -1.72
LDLRP01130 UQCRBP1-201ENST00000421129 336 ntBASIC4.3□□□□□ -1.72
LDLRP01130 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.3□□□□□ -1.72
LDLRP01130 RWDD4P2-201ENST00000426392 563 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AP001324.1-201ENST00000428553 399 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.3□□□□□ -1.72
LDLRP01130 USP9YP28-201ENST00000435142 589 ntBASIC4.3□□□□□ -1.72
LDLRP01130 CBX1P1-201ENST00000440184 427 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.3□□□□□ -1.72
LDLRP01130 AL591719.1-201ENST00000444669 744 ntBASIC4.3□□□□□ -1.72
LDLRP01130 NPM1P13-201ENST00000452663 865 ntBASIC4.3□□□□□ -1.72
LDLRP01130 MRPL35P4-201ENST00000453682 566 ntBASIC4.3□□□□□ -1.72
LDLRP01130 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.3□□□□□ -1.72
LDLRP01130 SNORA84-201ENST00000459229 133 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AP000563.1-201ENST00000490865 758 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.3□□□□□ -1.72
LDLRP01130 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 MED28P5-201ENST00000528254 438 ntBASIC4.3□□□□□ -1.72
LDLRP01130 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.3□□□□□ -1.72
LDLRP01130 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.3□□□□□ -1.72
LDLRP01130 CYP4A43P-201ENST00000568156 121 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AC034105.4-201ENST00000568304 277 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.3□□□□□ -1.72
LDLRP01130 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.3□□□□□ -1.72
LDLRP01130 AC022726.1-201ENST00000587475 207 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AC008638.3-201ENST00000603341 463 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AP002360.3-201ENST00000607673 710 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AL355816.1-201ENST00000607951 118 ntBASIC4.3□□□□□ -1.72
LDLRP01130 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 AC023043.4-201ENST00000612081 449 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.3□□□□□ -1.72
LDLRP01130 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.3□□□□□ -1.72
LDLRP01130 AC090116.1-201ENST00000615679 446 ntBASIC4.3□□□□□ -1.72
LDLRP01130 VN1R7P-201ENST00000619242 903 ntBASIC4.3□□□□□ -1.72
LDLRP01130 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.3□□□□□ -1.72
LDLRP01130 CR392039.4-201ENST00000624968 501 ntBASIC4.3□□□□□ -1.72
LDLRP01130 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms