Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RN7SKP96-201ENST00000516948 297 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFBP01127 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFBP01127 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.17□□□□□ -1.74
PDGFBP01127 CENPUP2-201ENST00000555897 1186 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFBP01127 AC087499.8-201ENST00000578406 226 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.17□□□□□ -1.74
PDGFBP01127 IMMP1LP1-201ENST00000605170 488 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AL391497.1-201ENST00000608671 547 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC095038.2-201ENST00000621464 1070 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC091905.2-201ENST00000623143 306 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AC007546.2-201ENST00000623996 360 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFBP01127 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PDGFBP01127 OR11H5P-202ENST00000641612 1325 ntBASIC4.17□□□□□ -1.74
PDGFBP01127 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFBP01127 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
PDGFBP01127 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PDGFBP01127 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFBP01127 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PDGFBP01127 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFBP01127 AC083899.2-201ENST00000423285 1376 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PDGFBP01127 AL512646.1-201ENST00000269395 1077 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 MIR16-2-201ENST00000362117 81 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 RNA5SP239-201ENST00000410218 129 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC004987.3-201ENST00000413879 771 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFBP01127 RNFT1P2-201ENST00000443064 757 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFBP01127 RPS11P1-201ENST00000451072 473 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AL035407.2-201ENST00000454090 378 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 BX510359.1-201ENST00000456973 237 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFBP01127 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFBP01127 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFBP01127 AC104619.4-201ENST00000510773 249 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFBP01127 AC112206.4-201ENST00000515142 405 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFBP01127 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFBP01127 RN7SKP234-201ENST00000517173 224 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC083923.1-201ENST00000523708 376 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 AC092451.2-201ENST00000538746 658 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFBP01127 CYCSP30-201ENST00000546447 172 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFBP01127 MTND4LP25-201ENST00000570218 163 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 U3.45-201ENST00000607547 219 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFBP01127 AC004943.3-201ENST00000624116 600 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFBP01127 AC017104.5-201ENST00000637647 639 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 AL672167.1-205ENST00000641112 3080 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 AC018529.3-201ENST00000624212 2254 ntBASIC4.16□□□□□ -1.74
PDGFBP01127 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFBP01127 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDGFBP01127 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.15□□□□□ -1.74
PDGFBP01127 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
PDGFBP01127 AC011978.2-201ENST00000569835 2054 ntBASIC4.15□□□□□ -1.74
PDGFBP01127 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.15□□□□□ -1.74
PDGFBP01127 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.15□□□□□ -1.74
PDGFBP01127 ENSAP3-201ENST00000312710 333 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
PDGFBP01127 RNA5SP27-201ENST00000363839 119 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 SNORA48.2-201ENST00000390926 124 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 DNAJC19P6-201ENST00000401853 280 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 RN7SKP199-201ENST00000410325 305 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AC245052.5-201ENST00000416320 649 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFBP01127 Z74021.1-201ENST00000423610 407 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.15□□□□□ -1.75
PDGFBP01127 HSPD1P21-201ENST00000436541 245 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AC092809.1-201ENST00000441469 474 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.15□□□□□ -1.75
PDGFBP01127 BTF3P6-201ENST00000448054 499 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.15□□□□□ -1.75
PDGFBP01127 RPS29P2-201ENST00000479278 136 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AL049873.1-201ENST00000480540 376 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFBP01127 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFBP01127 AC104108.1-201ENST00000509930 412 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 RNU6-334P-201ENST00000517072 102 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.15□□□□□ -1.75
PDGFBP01127 AC113192.3-201ENST00000529152 742 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 UBTFL9-201ENST00000534504 1148 ntBASIC4.15□□□□□ -1.75
PDGFBP01127 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.15□□□□□ -1.75
PDGFBP01127 AC006064.5-201ENST00000541782 248 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms