Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AP001642.1-201ENST00000624727 2117 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4BO75351 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4BO75351 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VPS4BO75351 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 MTND4P4-201ENST00000439033 1366 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC021242.1-201ENST00000507315 2035 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4BO75351 RNA5SP123-201ENST00000363244 119 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 Y_RNA.302-201ENST00000364997 102 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 RPL23AP29-201ENST00000397284 453 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 NCSTNP1-201ENST00000406229 144 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AL450338.1-201ENST00000407987 512 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 MIR1182-201ENST00000408363 97 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 MIR1271-201ENST00000408537 86 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 TMBIM7P-201ENST00000418074 855 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 RPL36AP10-201ENST00000421785 322 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 CYCSP46-201ENST00000423569 204 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4BO75351 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS4BO75351 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 SLC31A1P1-201ENST00000451221 567 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 RPL23AP35-201ENST00000451906 501 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 OR6C5P-201ENST00000452388 923 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 RN7SL385P-201ENST00000468873 276 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC116337.2-201ENST00000477662 156 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC068587.1-201ENST00000483613 781 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 RN7SL591P-201ENST00000496150 292 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC108078.3-201ENST00000502633 489 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC006499.5-201ENST00000505037 514 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VPS4BO75351 RPL7L1P13-201ENST00000511702 739 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 RNU2-30P-201ENST00000516209 141 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 RNY4P37-201ENST00000516225 96 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 OR6C7P-201ENST00000547875 934 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS4BO75351 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS4BO75351 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 AC011447.4-201ENST00000587562 111 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS4BO75351 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 AC087752.4-201ENST00000605911 462 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AL031775.1-201ENST00000607014 887 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS4BO75351 AC100793.4-201ENST00000613683 429 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 MIR8069-1-201ENST00000616627 86 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 MIR8069-2-201ENST00000621412 86 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC012414.7-202ENST00000622705 1090 ntBASIC4.92□□□□□ -1.62
VPS4BO75351 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4BO75351 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS4BO75351 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
VPS4BO75351 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS4BO75351 MTND4P26-201ENST00000415971 1359 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS4BO75351 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS4BO75351 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS4BO75351 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VPS4BO75351 Y_RNA.25-201ENST00000362528 102 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 RNU4-91P-201ENST00000364778 135 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 RN7SKP142-201ENST00000411236 328 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 MTCO2P34-201ENST00000421994 607 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS4BO75351 OR5BE1P-201ENST00000425977 939 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 MTND4P6-201ENST00000438297 472 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 AC092641.1-201ENST00000440229 772 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS4BO75351 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 Z92846.1-201ENST00000456203 268 ntBASIC4.91□□□□□ -1.62
VPS4BO75351 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS4BO75351 CYCSP34-201ENST00000458172 304 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms