Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 HLA-N-201ENST00000437516 135 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC016831.4-201ENST00000438302 307 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.11□□□□□ -1.75
SSX4O60224 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.11□□□□□ -1.75
SSX4O60224 ELOCP13-201ENST00000443934 329 ntBASIC4.11□□□□□ -1.75
SSX4O60224 PTENP1-201ENST00000447117 1215 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC104651.2-201ENST00000447549 528 ntBASIC4.11□□□□□ -1.75
SSX4O60224 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 AL451050.1-201ENST00000450126 415 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX4O60224 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.11□□□□□ -1.75
SSX4O60224 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 AC011979.1-201ENST00000472300 483 ntBASIC4.11□□□□□ -1.75
SSX4O60224 RPS3AP6-201ENST00000484430 795 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AK3P4-201ENST00000504283 583 ntBASIC4.11□□□□□ -1.75
SSX4O60224 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX4O60224 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 EEF1A1P37-201ENST00000522748 715 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX4O60224 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 AC009643.1-201ENST00000532030 391 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC133555.2-201ENST00000550213 292 ntBASIC4.11□□□□□ -1.75
SSX4O60224 MTND4P33-201ENST00000556706 766 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AGGF1P6-201ENST00000569213 976 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.11□□□□□ -1.75
SSX4O60224 RPL7P50-201ENST00000600588 727 ntBASIC4.11□□□□□ -1.75
SSX4O60224 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.11□□□□□ -1.75
SSX4O60224 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.11□□□□□ -1.75
SSX4O60224 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.11□□□□□ -1.75
SSX4O60224 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.11□□□□□ -1.75
SSX4O60224 AC113194.1-201ENST00000606037 500 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 AC007497.1-201ENST00000610421 561 ntBASIC4.11□□□□□ -1.75
SSX4O60224 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
SSX4O60224 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.11□□□□□ -1.75
SSX4O60224 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.11□□□□□ -1.75
SSX4O60224 MIR6715B-201ENST00000637172 77 ntBASIC4.11□□□□□ -1.75
SSX4O60224 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
SSX4O60224 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSX4O60224 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX4O60224 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSX4O60224 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SSX4O60224 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSX4O60224 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX4O60224 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 Z73965.1-201ENST00000623412 2297 ntBASIC4.1□□□□□ -1.75
SSX4O60224 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX4O60224 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX4O60224 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSX4O60224 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSX4O60224 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSX4O60224 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSX4O60224 AC126755.2-208ENST00000327792 462 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC138969.1-213ENST00000331436 462 ntBASIC4.1□□□□□ -1.75
SSX4O60224 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSX4O60224 RNU6-1066P-201ENST00000363573 105 ntBASIC4.1□□□□□ -1.75
SSX4O60224 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 RNU6-1279P-201ENST00000383917 103 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AL357515.1-201ENST00000402967 542 ntBASIC4.1□□□□□ -1.75
SSX4O60224 RSU1P3-201ENST00000412878 835 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AL136133.1-201ENST00000413694 376 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 NUP35P2-201ENST00000416748 943 ntBASIC4.1□□□□□ -1.75
SSX4O60224 BOLA3P4-201ENST00000418151 400 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 RPL7P44-201ENST00000424827 742 ntBASIC4.1□□□□□ -1.75
SSX4O60224 RPL18P10-201ENST00000425606 538 ntBASIC4.1□□□□□ -1.75
SSX4O60224 NANOGP6-201ENST00000429190 847 ntBASIC4.1□□□□□ -1.75
SSX4O60224 IFNNP1-201ENST00000429219 553 ntBASIC4.1□□□□□ -1.75
SSX4O60224 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.1□□□□□ -1.75
SSX4O60224 USP9YP22-201ENST00000438971 294 ntBASIC4.1□□□□□ -1.75
SSX4O60224 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 Z73417.1-201ENST00000447373 778 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC004022.1-201ENST00000447766 1066 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC000111.2-201ENST00000448200 210 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 HMGN3P1-201ENST00000453847 193 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 FGF7P3-201ENST00000454645 303 ntBASIC4.1□□□□□ -1.75
SSX4O60224 RPS5P7-201ENST00000456664 608 ntBASIC4.1□□□□□ -1.75
SSX4O60224 USP9YP25-201ENST00000457708 443 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AP000893.1-201ENST00000474462 794 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC068587.1-201ENST00000483613 781 ntBASIC4.1□□□□□ -1.75
SSX4O60224 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 AC083829.1-201ENST00000503756 657 ntBASIC4.1□□□□□ -1.75
SSX4O60224 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.1□□□□□ -1.75
SSX4O60224 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.1□□□□□ -1.75
SSX4O60224 RNU6-709P-201ENST00000517257 104 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX4O60224 IFITM8P-201ENST00000522529 394 ntBASIC4.1□□□□□ -1.75
SSX4O60224 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.1□□□□□ -1.75
SSX4O60224 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms