Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RN7SKP276-201ENST00000516242 268 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 RNA5SP164-201ENST00000516533 110 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC131935.1-201ENST00000524621 333 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC234775.3-201ENST00000564612 656 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 RN7SL66P-201ENST00000582099 264 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC084373.1-201ENST00000603311 235 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC006077.1-201ENST00000604746 343 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 SNORA62.6-201ENST00000606322 83 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC136428.4-201ENST00000634254 1155 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 CR589904.1-203ENST00000636515 318 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 AC119674.1-207ENST00000641355 633 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 Z83843.1-201ENST00000604070 3685 ntBASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
LINC01558Q9Y6Z2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 NACA3P-201ENST00000359690 648 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC068538.1-201ENST00000376856 336 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPS3AP26-201ENST00000398259 784 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 SEPT7P2-202ENST00000398921 823 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AL138880.1-201ENST00000405824 642 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MIR1289-1-201ENST00000408836 144 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RNU6-1077P-201ENST00000410506 102 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AL590806.1-201ENST00000415818 853 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPS26P13-201ENST00000419030 330 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MTCYBP7-201ENST00000419540 1134 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPS6P14-201ENST00000425165 719 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 ETF1P3-201ENST00000430422 1160 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPSAP32-201ENST00000432681 526 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 ELOCP11-201ENST00000436690 332 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC110602.1-201ENST00000437414 318 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPS13P2-201ENST00000437890 455 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC005154.2-201ENST00000438110 379 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPL23AP33-201ENST00000442301 452 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 ELOCP16-201ENST00000444494 332 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC010655.1-201ENST00000449336 292 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC091685.2-201ENST00000454924 864 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC023598.1-201ENST00000472521 361 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC090525.1-201ENST00000479116 478 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPS4XP1-201ENST00000482189 787 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 HMGB1P38-201ENST00000490557 577 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC026979.1-201ENST00000492525 396 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 RPL7P23-201ENST00000493874 747 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 HMGB1P3-201ENST00000502802 616 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 SEM1P1-201ENST00000506694 209 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC025881.1-201ENST00000518851 512 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC092490.3-201ENST00000545370 572 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC023161.2-201ENST00000551218 780 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MIR3154-201ENST00000577829 84 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC006116.3-201ENST00000592968 361 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 DUXAP3-201ENST00000603616 594 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC007620.3-201ENST00000608131 497 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MIR6070-201ENST00000613967 103 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 CYCSP41-201ENST00000616920 296 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC068831.7-201ENST00000616954 363 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 MIR6853-201ENST00000619642 74 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC010297.1-201ENST00000623948 149 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AL691477.1-201ENST00000624398 162 ntBASIC1.74□□□□□ -2.13
LINC01558Q9Y6Z2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms