Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 MIR585-201ENST00000384887 94 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC013442.1-201ENST00000397347 228 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AF186996.5-201ENST00000418098 904 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 OR6C64P-201ENST00000419708 825 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 USP9YP26-201ENST00000421008 661 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AL035410.1-201ENST00000427409 427 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL7P11-201ENST00000437586 658 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 PPIAP3-201ENST00000450588 505 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 CEACAMP6-201ENST00000452007 574 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AL691482.1-201ENST00000453255 87 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 PABPC1P3-201ENST00000469174 459 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC090686.1-201ENST00000481577 749 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 MRPS33P2-201ENST00000507850 322 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC005798.1-201ENST00000513715 387 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AF186190.1-201ENST00000517470 480 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC104986.1-201ENST00000517978 436 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 HMGB3P26-201ENST00000560051 582 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 MAGOH2P-202ENST00000584384 429 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC020914.6-201ENST00000594327 272 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AL355812.1-201ENST00000603215 216 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 Z99497.2-201ENST00000603634 310 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC100827.5-201ENST00000615883 426 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 AC091953.3-201ENST00000623220 236 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 MTCO1P24-201ENST00000515438 1558 ntBASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL4A3BPQ9Y5P4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 RN7SKP149-201ENST00000363008 344 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 CYCSP45-201ENST00000402289 315 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 MTCYBP39-201ENST00000437562 491 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC006466.1-201ENST00000438721 289 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC112498.1-201ENST00000444401 332 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 BTF3P6-201ENST00000448054 499 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC009963.2-201ENST00000453431 138 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC022034.3-201ENST00000471393 478 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 RPL30P6-201ENST00000475925 342 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 RPS23P1-201ENST00000491662 432 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC111000.2-201ENST00000507775 550 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC009117.1-201ENST00000563948 554 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 LARP7P2-201ENST00000575306 125 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 MIR4480-201ENST00000582492 71 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC121247.2-201ENST00000604776 136 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC018714.1-201ENST00000605028 208 ntBASIC5.53□□□□□ -1.52
COL4A3BPQ9Y5P4 AC090116.1-201ENST00000615679 446 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms