Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AL021368.2-201ENST00000606125 5352 ntBASIC3.47□□□□□ -1.85
VAPAQ9P0L0 AC025125.1-201ENST00000624743 1922 ntBASIC3.46□□□□□ -1.85
VAPAQ9P0L0 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 MIR153-1-201ENST00000384914 90 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RPS26P8-201ENST00000393490 348 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RNA5SP317-201ENST00000410176 116 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RNA5SP311-201ENST00000411290 116 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RPL31P45-201ENST00000419532 356 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 SETD6P1-201ENST00000444575 317 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RPL34P26-201ENST00000445636 354 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 OR9M1P-201ENST00000459641 921 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AP000873.1-201ENST00000463987 400 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RPL37P6-202ENST00000464216 403 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC084357.1-201ENST00000473404 255 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC078785.3-201ENST00000476607 425 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 ACTG1P13-201ENST00000486987 1043 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 HMGB3P14-201ENST00000494195 599 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RNA5SP315-201ENST00000516340 116 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RNA5SP312-201ENST00000517068 116 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 IGKV2-36-201ENST00000519999 223 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AP006245.1-201ENST00000522549 120 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 PDCL2P2-201ENST00000533651 189 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 CR383656.6-201ENST00000550518 394 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 RMST_8.1-201ENST00000610287 165 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 MIR7641-1-201ENST00000627518 61 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 U6.98-201ENST00000637157 84 ntBASIC3.46□□□□□ -1.86
VAPAQ9P0L0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAPAQ9P0L0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 RNA5SP235-201ENST00000365411 114 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 SNORA3.3-201ENST00000408712 125 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AL049610.1-201ENST00000423374 372 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 OSTCP5-201ENST00000425293 453 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 TPTE2P6-202ENST00000445572 1007 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 CFTRP1-201ENST00000456646 183 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC004801.2-202ENST00000463559 283 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 ADAM3B-201ENST00000569937 840 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC022146.1-201ENST00000595307 847 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 LLPHP1-201ENST00000603571 367 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC113194.1-201ENST00000606037 500 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AL592295.2-201ENST00000612578 206 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 MIR6716-201ENST00000613413 80 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 FP236240.3-201ENST00000623061 327 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC024560.2-201ENST00000507981 1497 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC000367.1-201ENST00000452711 1766 ntBASIC3.45□□□□□ -1.86
VAPAQ9P0L0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.45□□□□□ -1.86
VAPAQ9P0L0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VAPAQ9P0L0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms