Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC112230.1-201ENST00000604342 547 ntBASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 AL592436.1-201ENST00000605135 558 ntBASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 AL354798.1-201ENST00000622505 329 ntBASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 AC138907.10-201ENST00000623708 983 ntBASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TM9SF3Q9HD45 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 SNORA60-201ENST00000362396 134 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 SNORA71.3-201ENST00000362582 128 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 SNORD6-201ENST00000365444 73 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AL589655.1-201ENST00000405398 482 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 Z86062.1-201ENST00000406773 777 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 MTATP6P31-201ENST00000406985 692 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 RNA5SP44-201ENST00000410446 133 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC010385.1-201ENST00000412374 256 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 RPS15AP40-201ENST00000419621 391 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 FABP3P2-201ENST00000453169 399 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 RNU6-775P-201ENST00000459318 96 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC027176.2-201ENST00000559166 746 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 MIR4644-201ENST00000579929 84 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 MIR5684-201ENST00000585074 65 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC012603.1-201ENST00000606424 528 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC242628.1-201ENST00000606810 391 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 AC012442.3-202ENST00000636742 206 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TM9SF3Q9HD45 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 METTL21EP-201ENST00000298105 713 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 RNA5SP189-201ENST00000364920 115 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 RNU6-98P-201ENST00000384173 107 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 RNA5SP306-201ENST00000411087 107 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 RPL37P1-201ENST00000432310 284 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 ANP32BP2-201ENST00000454525 545 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC006517.1-201ENST00000480485 328 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 TRAV31-201ENST00000502780 342 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC005921.1-201ENST00000510589 286 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC022784.5-201ENST00000522241 437 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 MIR6868-201ENST00000611215 58 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 AC012531.5-201ENST00000611375 151 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 USP8P1-201ENST00000494673 3183 ntBASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TM9SF3Q9HD45 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 FAM35DP-201ENST00000323387 2712 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 SNORA70.4-201ENST00000365509 134 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 RNU6-213P-201ENST00000384051 104 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 EIF5P1-201ENST00000400019 1231 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 RNU2-37P-201ENST00000410695 177 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC244453.4-201ENST00000419150 388 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AC092647.1-201ENST00000420654 287 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 TBCAP1-201ENST00000436520 327 ntBASIC4.03□□□□□ -1.76
TM9SF3Q9HD45 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms