Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AC091515.1-201ENST00000548110 679 ntBASIC4.66□□□□□ -1.66
UPF2Q9HAU5 MTND1P24-201ENST00000552175 861 ntBASIC4.66□□□□□ -1.66
UPF2Q9HAU5 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AC008507.2-201ENST00000588402 1176 ntBASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AC234771.5-201ENST00000600161 514 ntBASIC4.66□□□□□ -1.66
UPF2Q9HAU5 RNVU1-4-201ENST00000612985 164 ntBASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AP000843.1-201ENST00000624880 701 ntBASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
UPF2Q9HAU5 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.65□□□□□ -1.66
UPF2Q9HAU5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPF2Q9HAU5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPF2Q9HAU5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
UPF2Q9HAU5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPF2Q9HAU5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
UPF2Q9HAU5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
UPF2Q9HAU5 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 RNU6-1279P-201ENST00000383917 103 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC093719.1-202ENST00000392735 373 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 Z98941.1-201ENST00000407764 100 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 RN7SKP222-201ENST00000410651 315 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 RN7SKP33-201ENST00000410942 340 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 RPL30P2-201ENST00000414021 291 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC106883.1-201ENST00000418805 562 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 DNAJC19P7-201ENST00000428811 344 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC114973.1-201ENST00000429057 632 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 MTATP6P17-201ENST00000431030 672 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 MTND1P26-201ENST00000440488 538 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC108941.1-201ENST00000502853 530 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 MIR4330-201ENST00000579077 105 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AL356218.2-201ENST00000605264 187 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AL354760.1-201ENST00000608357 643 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC009313.2-201ENST00000417893 1941 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UPF2Q9HAU5 ZNF90P1-201ENST00000480493 1951 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 AC005261.4-201ENST00000600047 1385 ntBASIC4.65□□□□□ -1.67
UPF2Q9HAU5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 RNU1-87P-201ENST00000363727 170 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 SNORA57.3-201ENST00000411095 141 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 RPL26P37-201ENST00000411983 438 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC127526.1-201ENST00000417526 366 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC002075.2-201ENST00000425207 252 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 BMS1P19-201ENST00000433925 393 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL009048.1-201ENST00000450437 298 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 RPL7P55-201ENST00000450522 746 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 HMGB1P5-202ENST00000451497 985 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC099560.2-201ENST00000457554 255 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC008379.1-201ENST00000463655 464 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC008489.1-201ENST00000524271 483 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL109741.3-201ENST00000561748 592 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC106734.1-201ENST00000568646 663 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 MIR4700-201ENST00000578311 74 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 KLKP1-201ENST00000595979 403 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC078880.5-201ENST00000617845 421 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL121890.3-201ENST00000618494 516 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL512427.1-201ENST00000618593 349 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AL078595.3-201ENST00000623815 1166 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AP003476.1-201ENST00000623984 516 ntBASIC4.64□□□□□ -1.67
UPF2Q9HAU5 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.64□□□□□ -1.67
UPF2Q9HAU5 AC013437.2-201ENST00000639587 677 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms