Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AP000873.5-201ENST00000533906 236 ntBASIC4.99□□□□□ -1.61
SMOQ99835 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.99□□□□□ -1.61
SMOQ99835 AL358913.1-201ENST00000554342 121 ntBASIC4.99□□□□□ -1.61
SMOQ99835 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.99□□□□□ -1.61
SMOQ99835 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.99□□□□□ -1.61
SMOQ99835 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.99□□□□□ -1.61
SMOQ99835 RN7SL652P-201ENST00000577769 300 ntBASIC4.99□□□□□ -1.61
SMOQ99835 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.99□□□□□ -1.61
SMOQ99835 RN7SL690P-201ENST00000582087 240 ntBASIC4.99□□□□□ -1.61
SMOQ99835 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.99□□□□□ -1.61
SMOQ99835 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.99□□□□□ -1.61
SMOQ99835 MTCYBP22-201ENST00000603788 447 ntBASIC4.99□□□□□ -1.61
SMOQ99835 AC024560.3-201ENST00000608482 349 ntBASIC4.99□□□□□ -1.61
SMOQ99835 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.99□□□□□ -1.61
SMOQ99835 AC243756.2-201ENST00000618406 463 ntBASIC4.99□□□□□ -1.61
SMOQ99835 AL590240.3-201ENST00000621416 943 ntBASIC4.99□□□□□ -1.61
SMOQ99835 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.99□□□□□ -1.61
SMOQ99835 AC096656.1-201ENST00000623826 1364 ntBASIC4.99□□□□□ -1.61
SMOQ99835 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMOQ99835 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SMOQ99835 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
SMOQ99835 AL034370.1-201ENST00000397254 1590 ntBASIC4.99□□□□□ -1.61
SMOQ99835 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
SMOQ99835 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.99□□□□□ -1.61
SMOQ99835 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SMOQ99835 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SMOQ99835 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 AL512646.1-201ENST00000269395 1077 ntBASIC4.98□□□□□ -1.61
SMOQ99835 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SMOQ99835 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 RNU6-660P-201ENST00000364566 109 ntBASIC4.98□□□□□ -1.61
SMOQ99835 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SMOQ99835 RNU6-398P-201ENST00000384143 109 ntBASIC4.98□□□□□ -1.61
SMOQ99835 RNU6-1151P-201ENST00000384684 107 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AL049697.2-201ENST00000403708 294 ntBASIC4.98□□□□□ -1.61
SMOQ99835 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 MIR1284-201ENST00000408337 120 ntBASIC4.98□□□□□ -1.61
SMOQ99835 RN7SKP106-201ENST00000410832 272 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AL591848.1-201ENST00000413092 322 ntBASIC4.98□□□□□ -1.61
SMOQ99835 FCF1P2-201ENST00000415284 583 ntBASIC4.98□□□□□ -1.61
SMOQ99835 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 ATG4AP1-201ENST00000416893 538 ntBASIC4.98□□□□□ -1.61
SMOQ99835 RPL7P57-201ENST00000423238 740 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.98□□□□□ -1.61
SMOQ99835 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.98□□□□□ -1.61
SMOQ99835 AC011753.3-201ENST00000443436 406 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 COX6CP2-201ENST00000444980 225 ntBASIC4.98□□□□□ -1.61
SMOQ99835 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 AC108463.1-201ENST00000450258 347 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.98□□□□□ -1.61
SMOQ99835 CEACAMP6-201ENST00000452007 574 ntBASIC4.98□□□□□ -1.61
SMOQ99835 MTCO3P11-201ENST00000455103 774 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AC005912.1-201ENST00000495392 255 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.98□□□□□ -1.61
SMOQ99835 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 AC079140.3-201ENST00000511111 550 ntBASIC4.98□□□□□ -1.61
SMOQ99835 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.98□□□□□ -1.61
SMOQ99835 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.98□□□□□ -1.61
SMOQ99835 AF279873.1-201ENST00000523393 313 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AP001207.1-201ENST00000524051 481 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.98□□□□□ -1.61
SMOQ99835 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.98□□□□□ -1.61
SMOQ99835 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SMOQ99835 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.98□□□□□ -1.61
SMOQ99835 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 MIR4675-201ENST00000577898 77 ntBASIC4.98□□□□□ -1.61
SMOQ99835 VN1R92P-201ENST00000598511 928 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AC239868.4-201ENST00000608318 671 ntBASIC4.98□□□□□ -1.61
SMOQ99835 AC106028.5-201ENST00000610332 395 ntBASIC4.98□□□□□ -1.61
SMOQ99835 MIR6820-201ENST00000611508 62 ntBASIC4.98□□□□□ -1.61
SMOQ99835 MIR7844-201ENST00000616161 122 ntBASIC4.98□□□□□ -1.61
SMOQ99835 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.98□□□□□ -1.61
SMOQ99835 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.98□□□□□ -1.61
SMOQ99835 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.98□□□□□ -1.61
SMOQ99835 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SMOQ99835 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SMOQ99835 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.98□□□□□ -1.61
SMOQ99835 STX3-208ENST00000641815 3236 ntBASIC4.98□□□□□ -1.61
SMOQ99835 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SMOQ99835 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SMOQ99835 ZFRP1-201ENST00000457579 2970 ntBASIC4.98□□□□□ -1.61
SMOQ99835 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.97□□□□□ -1.61
SMOQ99835 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms