Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC006042.3-201ENST00000454684 1469 ntBASIC3.59□□□□□ -1.84
COL21A1Q96P44 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.59□□□□□ -1.84
COL21A1Q96P44 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 XIAPP3-201ENST00000312918 795 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 RNU6-213P-201ENST00000384051 104 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AL590290.1-201ENST00000405336 380 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 ZNF602P-201ENST00000405929 924 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AL691447.1-201ENST00000419456 387 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 OR5AW1P-201ENST00000426334 1006 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC017083.1-201ENST00000428093 483 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 RNU7-170P-201ENST00000459303 61 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 OR9M1P-201ENST00000459641 921 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC023050.1-201ENST00000498198 304 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 SUMO2P20-201ENST00000520803 283 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AL121576.1-201ENST00000556055 276 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC067805.1-201ENST00000559344 470 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC012414.2-201ENST00000559474 187 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC022916.3-201ENST00000592961 742 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC090525.3-201ENST00000605601 189 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC006946.3-201ENST00000609791 756 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC073530.2-201ENST00000623987 261 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 CR392039.4-201ENST00000624968 501 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 CFTRP2-201ENST00000634304 199 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 AF001550.2-201ENST00000636643 217 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL21A1Q96P44 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
COL21A1Q96P44 AC025125.1-201ENST00000624743 1922 ntBASIC3.58□□□□□ -1.84
COL21A1Q96P44 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL21A1Q96P44 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL21A1Q96P44 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL21A1Q96P44 RNU6-452P-201ENST00000384406 107 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 AL159169.1-201ENST00000421119 127 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 RPL30P3-201ENST00000424262 333 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 MTND4P31-201ENST00000425607 1343 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 RPL7P2-201ENST00000427639 268 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL21A1Q96P44 CYCSP53-201ENST00000455540 265 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 AC084198.1-201ENST00000477747 402 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 SNORA70.14-201ENST00000516205 110 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL21A1Q96P44 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 CYCSP30-201ENST00000546447 172 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 AC084824.1-201ENST00000550917 1005 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 AC100814.1-201ENST00000606963 623 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 AC090912.3-201ENST00000609775 533 ntBASIC3.57□□□□□ -1.84
COL21A1Q96P44 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL21A1Q96P44 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.57□□□□□ -1.84
COL21A1Q96P44 FAM91A3P-201ENST00000456826 2544 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 EXOC5P1-201ENST00000510543 1969 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 AC066616.2-201ENST00000559334 1481 ntBASIC3.56□□□□□ -1.84
COL21A1Q96P44 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL21A1Q96P44 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms