Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS50Q96JG6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AL353743.4-201ENST00000422653 1547 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 CR381670.1-201ENST00000624291 1693 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 KPNA2P2-201ENST00000419546 1489 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC016716.1-201ENST00000265882 708 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 RNU6-1066P-201ENST00000363573 105 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 RNU6-621P-201ENST00000364752 109 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AL109941.1-201ENST00000401925 229 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 ATG4AP1-201ENST00000416893 538 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 TIMM9P2-201ENST00000419324 266 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 EI24P4-201ENST00000423683 1078 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AL590762.4-201ENST00000425885 253 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 RPP40P1-201ENST00000426762 456 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 COX6CP13-201ENST00000428703 226 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC007559.1-201ENST00000428736 355 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 MTCO2P7-201ENST00000446518 666 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 snoU13.20-201ENST00000459180 104 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 RN7SL319P-201ENST00000480656 221 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC020890.1-201ENST00000491837 504 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC097173.1-201ENST00000505862 819 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC005178.1-201ENST00000508392 440 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC084824.1-201ENST00000550917 1005 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 MIR4436B2-201ENST00000581415 91 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC103987.3-201ENST00000582071 292 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 MIR4436B1-201ENST00000583272 91 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AL136295.6-201ENST00000610486 658 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 SNX18P1Y-201ENST00000616231 511 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 AC098679.4-201ENST00000624241 654 ntBASIC4.78□□□□□ -1.64
VPS50Q96JG6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.78□□□□□ -1.64
VPS50Q96JG6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
VPS50Q96JG6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
VPS50Q96JG6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
VPS50Q96JG6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS50Q96JG6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
VPS50Q96JG6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VPS50Q96JG6 OR10J6P-201ENST00000289731 930 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 SNORA51.12-201ENST00000384448 134 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 RNU6-1151P-201ENST00000384684 107 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
VPS50Q96JG6 AL160275.2-201ENST00000412010 394 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS50Q96JG6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS50Q96JG6 AC009237.2-201ENST00000421358 284 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 EIF4EP1-201ENST00000422311 642 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
VPS50Q96JG6 AC009965.2-201ENST00000425328 970 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.77□□□□□ -1.65
VPS50Q96JG6 AC010153.1-201ENST00000432862 727 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 AL137845.2-201ENST00000444292 988 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 TAF9P1-201ENST00000445421 515 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 RPS27AP15-201ENST00000447672 466 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 AL445669.2-201ENST00000454425 421 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 TAF9P2-201ENST00000454958 515 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 RPL37P3-201ENST00000456825 293 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 NF1P3-201ENST00000457709 450 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 AC010307.1-201ENST00000467206 836 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 RPL30P6-201ENST00000475925 342 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 RPL7P16-201ENST00000479738 738 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 AC083982.1-201ENST00000485679 344 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.77□□□□□ -1.65
VPS50Q96JG6 SETP14-201ENST00000497538 873 ntBASIC4.77□□□□□ -1.65
VPS50Q96JG6 RNY4P37-201ENST00000516225 96 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms