Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.25□□□□□ -1.57
HPS3Q969F9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.25□□□□□ -1.57
HPS3Q969F9 AC110760.3-201ENST00000598794 467 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 AC093765.1-201ENST00000603758 881 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AC004223.4-201ENST00000612426 332 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 MIR8069-1-201ENST00000616627 86 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AC092650.2-201ENST00000619984 902 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 MIR8069-2-201ENST00000621412 86 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 AC120349.2-201ENST00000625002 298 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 AL442639.1-201ENST00000625030 1899 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.25□□□□□ -1.57
HPS3Q969F9 ZNF37BP-203ENST00000452306 1352 ntBASIC5.25□□□□□ -1.57
HPS3Q969F9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.25□□□□□ -1.57
HPS3Q969F9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HPS3Q969F9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AP001642.1-201ENST00000624727 2117 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.24□□□□□ -1.57
HPS3Q969F9 ELL2P3-201ENST00000457883 1602 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 RNA5SP391-201ENST00000363456 119 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AL590762.2-201ENST00000395798 571 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HPS3Q969F9 MIR1284-201ENST00000408337 120 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 MIR1271-201ENST00000408537 86 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC114755.2-201ENST00000413520 361 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AL590609.2-201ENST00000421430 368 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC104837.2-201ENST00000427236 424 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 YWHAZP8-201ENST00000436935 731 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 MTND4P32-201ENST00000437189 1237 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 RPS26P56-201ENST00000444468 240 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 RPL23AP35-201ENST00000451906 501 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 HIGD1AP8-201ENST00000453927 274 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 RNA5SP103-201ENST00000459503 118 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 RPS3AP41-201ENST00000462701 778 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 RPL7P1-201ENST00000468161 747 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 RPL7P9-201ENST00000468715 747 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 RN7SL860P-201ENST00000473738 223 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC010301.1-201ENST00000473936 355 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 MTND3P7-201ENST00000474435 343 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC104685.1-201ENST00000502445 371 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
HPS3Q969F9 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 SCARNA22-201ENST00000503991 125 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.24□□□□□ -1.57
HPS3Q969F9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HPS3Q969F9 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.24□□□□□ -1.57
HPS3Q969F9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC063949.1-201ENST00000552900 865 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.24□□□□□ -1.57
HPS3Q969F9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 VN1R90P-201ENST00000595717 726 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC015726.1-201ENST00000602353 681 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AP000811.1-201ENST00000603803 651 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC010738.1-201ENST00000604970 987 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.24□□□□□ -1.57
HPS3Q969F9 AC072039.2-201ENST00000608883 439 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AF246928.1-201ENST00000623768 87 ntBASIC5.24□□□□□ -1.57
HPS3Q969F9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.24□□□□□ -1.57
HPS3Q969F9 MTND4P34-201ENST00000572715 1371 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms