Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 MIR298-201ENST00000401212 88 ntBASIC4.3□□□□□ -1.72
LTBQ06643 RPS27AP11-201ENST00000402798 447 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AL136131.1-201ENST00000406079 803 ntBASIC4.3□□□□□ -1.72
LTBQ06643 RNU6-575P-201ENST00000411326 105 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AF274854.1-201ENST00000413236 615 ntBASIC4.3□□□□□ -1.72
LTBQ06643 TCEA1P4-201ENST00000415066 844 ntBASIC4.3□□□□□ -1.72
LTBQ06643 NPM1P11-201ENST00000417106 855 ntBASIC4.3□□□□□ -1.72
LTBQ06643 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 PAICSP7-201ENST00000419829 962 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 MTCO1P52-201ENST00000433928 531 ntBASIC4.3□□□□□ -1.72
LTBQ06643 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 GTF2IP7-202ENST00000436677 309 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 AP000936.3-201ENST00000438127 255 ntBASIC4.3□□□□□ -1.72
LTBQ06643 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 AL353093.1-201ENST00000441292 436 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AL591503.2-201ENST00000442314 1005 ntBASIC4.3□□□□□ -1.72
LTBQ06643 ARL5AP2-201ENST00000444698 533 ntBASIC4.3□□□□□ -1.72
LTBQ06643 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 RPL12P26-201ENST00000452430 487 ntBASIC4.3□□□□□ -1.72
LTBQ06643 MRPL42P4-201ENST00000453267 443 ntBASIC4.3□□□□□ -1.72
LTBQ06643 RPL21P134-201ENST00000453468 483 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AURKAPS2-201ENST00000454983 333 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AL133244.1-201ENST00000456007 258 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 RPL7AP10-201ENST00000481016 791 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC068724.1-201ENST00000487100 792 ntBASIC4.3□□□□□ -1.72
LTBQ06643 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 AC092045.1-201ENST00000495716 1231 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC010424.1-201ENST00000506336 297 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 HSPE1P23-201ENST00000509838 286 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.3□□□□□ -1.72
LTBQ06643 RNU6-1004P-201ENST00000516584 111 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC023632.1-201ENST00000518463 375 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 AC105185.1-201ENST00000518705 535 ntBASIC4.3□□□□□ -1.72
LTBQ06643 NDUFA5P2-201ENST00000519723 344 ntBASIC4.3□□□□□ -1.72
LTBQ06643 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.3□□□□□ -1.72
LTBQ06643 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LTBQ06643 AC092851.1-201ENST00000535964 478 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AL121766.1-201ENST00000547436 487 ntBASIC4.3□□□□□ -1.72
LTBQ06643 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.3□□□□□ -1.72
LTBQ06643 AC133555.2-201ENST00000550213 292 ntBASIC4.3□□□□□ -1.72
LTBQ06643 ISCA1P3-201ENST00000577104 373 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC011260.1-201ENST00000578420 472 ntBASIC4.3□□□□□ -1.72
LTBQ06643 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 AC006539.2-201ENST00000601729 572 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC022306.2-201ENST00000617563 647 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC007342.8-201ENST00000623278 678 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC092656.1-203ENST00000624134 423 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC090582.1-201ENST00000636321 199 ntBASIC4.3□□□□□ -1.72
LTBQ06643 AC087821.2-201ENST00000637086 450 ntBASIC4.3□□□□□ -1.72
LTBQ06643 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 AC019072.1-201ENST00000604535 1551 ntBASIC4.3□□□□□ -1.72
LTBQ06643 SAMMSON-226ENST00000642089 1582 ntBASIC4.3□□□□□ -1.72
LTBQ06643 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
LTBQ06643 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LTBQ06643 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.3□□□□□ -1.72
LTBQ06643 NCLP2-201ENST00000416078 1462 ntBASIC4.3□□□□□ -1.72
LTBQ06643 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LTBQ06643 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LTBQ06643 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LTBQ06643 AC096656.1-201ENST00000623826 1364 ntBASIC4.29□□□□□ -1.72
LTBQ06643 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LTBQ06643 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LTBQ06643 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.29□□□□□ -1.72
LTBQ06643 AC092435.4-201ENST00000623012 4159 ntBASIC4.29□□□□□ -1.72
LTBQ06643 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LTBQ06643 AL391994.1-201ENST00000254724 282 ntBASIC4.29□□□□□ -1.72
LTBQ06643 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LTBQ06643 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LTBQ06643 RNA5SP515-201ENST00000364570 118 ntBASIC4.29□□□□□ -1.72
LTBQ06643 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LTBQ06643 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LTBQ06643 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LTBQ06643 AL590762.2-201ENST00000395798 571 ntBASIC4.29□□□□□ -1.72
LTBQ06643 AC114755.2-201ENST00000413520 361 ntBASIC4.29□□□□□ -1.72
LTBQ06643 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.29□□□□□ -1.72
LTBQ06643 AL139421.1-201ENST00000423010 169 ntBASIC4.29□□□□□ -1.72
LTBQ06643 RPS26P2-201ENST00000440331 348 ntBASIC4.29□□□□□ -1.72
LTBQ06643 AC002542.1-201ENST00000440683 193 ntBASIC4.29□□□□□ -1.72
LTBQ06643 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.29□□□□□ -1.72
LTBQ06643 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.29□□□□□ -1.72
LTBQ06643 AL035551.1-201ENST00000446931 348 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms