Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC4P35249 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RFC4P35249 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RFC4P35249 RNU4-35P-201ENST00000362588 141 ntBASIC4.6□□□□□ -1.67
RFC4P35249 RNU6-1279P-201ENST00000383917 103 ntBASIC4.6□□□□□ -1.67
RFC4P35249 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC4P35249 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC4P35249 HSFY4P-201ENST00000415994 1181 ntBASIC4.6□□□□□ -1.67
RFC4P35249 RPF2P1-201ENST00000424137 906 ntBASIC4.6□□□□□ -1.67
RFC4P35249 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC4P35249 MTCYBP29-201ENST00000436327 1006 ntBASIC4.6□□□□□ -1.67
RFC4P35249 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC4P35249 RPL31P61-201ENST00000496160 376 ntBASIC4.6□□□□□ -1.67
RFC4P35249 SNORD116-26-201ENST00000516006 96 ntBASIC4.6□□□□□ -1.67
RFC4P35249 RN7SKP289-201ENST00000517244 295 ntBASIC4.6□□□□□ -1.67
RFC4P35249 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.6□□□□□ -1.67
RFC4P35249 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.6□□□□□ -1.67
RFC4P35249 AC024224.1-201ENST00000538284 609 ntBASIC4.6□□□□□ -1.67
RFC4P35249 TRAV11-201ENST00000539512 339 ntBASIC4.6□□□□□ -1.67
RFC4P35249 AC090877.1-201ENST00000561418 344 ntBASIC4.6□□□□□ -1.67
RFC4P35249 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.6□□□□□ -1.67
RFC4P35249 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RFC4P35249 AC012493.2-201ENST00000595083 291 ntBASIC4.6□□□□□ -1.67
RFC4P35249 AL163642.2-201ENST00000604722 1019 ntBASIC4.6□□□□□ -1.67
RFC4P35249 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC4P35249 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RFC4P35249 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.6□□□□□ -1.67
RFC4P35249 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC4P35249 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
RFC4P35249 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.59□□□□□ -1.67
RFC4P35249 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFC4P35249 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RFC4P35249 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
RFC4P35249 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFC4P35249 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFC4P35249 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
RFC4P35249 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RFC4P35249 RNU1-108P-201ENST00000362556 161 ntBASIC4.59□□□□□ -1.67
RFC4P35249 SNORA48.5-201ENST00000391143 135 ntBASIC4.59□□□□□ -1.67
RFC4P35249 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RFC4P35249 AC009965.2-201ENST00000425328 970 ntBASIC4.59□□□□□ -1.67
RFC4P35249 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC4P35249 AL645931.1-201ENST00000439737 410 ntBASIC4.59□□□□□ -1.67
RFC4P35249 AC010655.1-201ENST00000449336 292 ntBASIC4.59□□□□□ -1.67
RFC4P35249 BTF3P5-201ENST00000457252 467 ntBASIC4.59□□□□□ -1.67
RFC4P35249 RPL23AP12-201ENST00000467573 473 ntBASIC4.59□□□□□ -1.67
RFC4P35249 AC025554.1-201ENST00000505641 188 ntBASIC4.59□□□□□ -1.67
RFC4P35249 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC4P35249 AC090136.1-201ENST00000520009 240 ntBASIC4.59□□□□□ -1.67
RFC4P35249 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC4P35249 AL121766.1-201ENST00000547436 487 ntBASIC4.59□□□□□ -1.67
RFC4P35249 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.59□□□□□ -1.67
RFC4P35249 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.59□□□□□ -1.67
RFC4P35249 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.59□□□□□ -1.67
RFC4P35249 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.59□□□□□ -1.67
RFC4P35249 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.59□□□□□ -1.67
RFC4P35249 AL158196.1-201ENST00000616786 434 ntBASIC4.59□□□□□ -1.67
RFC4P35249 AC067852.7-201ENST00000623270 535 ntBASIC4.59□□□□□ -1.67
RFC4P35249 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
RFC4P35249 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
RFC4P35249 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 AC018529.3-201ENST00000624212 2254 ntBASIC4.58□□□□□ -1.68
RFC4P35249 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC4P35249 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.58□□□□□ -1.68
RFC4P35249 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RFC4P35249 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RFC4P35249 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RFC4P35249 DBIP2-201ENST00000419076 262 ntBASIC4.58□□□□□ -1.68
RFC4P35249 UBE2V1P1-201ENST00000430836 445 ntBASIC4.58□□□□□ -1.68
RFC4P35249 MTCO1P45-201ENST00000431457 267 ntBASIC4.58□□□□□ -1.68
RFC4P35249 RPL21P110-201ENST00000433345 446 ntBASIC4.58□□□□□ -1.68
RFC4P35249 AC006994.1-201ENST00000438212 839 ntBASIC4.58□□□□□ -1.68
RFC4P35249 RPS15AP29-201ENST00000445539 400 ntBASIC4.58□□□□□ -1.68
RFC4P35249 HMGB3P21-201ENST00000452483 547 ntBASIC4.58□□□□□ -1.68
RFC4P35249 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC4P35249 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.58□□□□□ -1.68
RFC4P35249 AC010683.1-201ENST00000473673 378 ntBASIC4.58□□□□□ -1.68
RFC4P35249 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
RFC4P35249 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.58□□□□□ -1.68
RFC4P35249 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.58□□□□□ -1.68
RFC4P35249 FTH1P9-201ENST00000513251 355 ntBASIC4.58□□□□□ -1.68
RFC4P35249 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC4P35249 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.58□□□□□ -1.68
RFC4P35249 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
RFC4P35249 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC4P35249 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.58□□□□□ -1.68
RFC4P35249 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 BMS1P7-201ENST00000602440 1052 ntBASIC4.58□□□□□ -1.68
RFC4P35249 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.58□□□□□ -1.68
RFC4P35249 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RFC4P35249 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms