Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC067852.3-201ENST00000589177 561 ntBASIC4.85□□□□□ -1.63
CPS1P31327 AC009464.1-201ENST00000615731 469 ntBASIC4.85□□□□□ -1.63
CPS1P31327 AP003485.2-201ENST00000623636 610 ntBASIC4.85□□□□□ -1.63
CPS1P31327 AL137790.1-201ENST00000634283 177 ntBASIC4.85□□□□□ -1.63
CPS1P31327 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CPS1P31327 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CPS1P31327 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CPS1P31327 AC007656.2-201ENST00000624902 4547 ntBASIC4.84□□□□□ -1.63
CPS1P31327 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CPS1P31327 DPPA2P2-201ENST00000418220 897 ntBASIC4.84□□□□□ -1.63
CPS1P31327 OR2X1P-201ENST00000421144 687 ntBASIC4.84□□□□□ -1.63
CPS1P31327 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.84□□□□□ -1.63
CPS1P31327 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.84□□□□□ -1.63
CPS1P31327 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CPS1P31327 AL360157.1-201ENST00000565962 87 ntBASIC4.84□□□□□ -1.63
CPS1P31327 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.84□□□□□ -1.63
CPS1P31327 AC063952.1-203ENST00000634410 658 ntBASIC4.84□□□□□ -1.63
CPS1P31327 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.84□□□□□ -1.63
CPS1P31327 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.84□□□□□ -1.63
CPS1P31327 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CPS1P31327 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CPS1P31327 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CPS1P31327 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.84□□□□□ -1.64
CPS1P31327 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CPS1P31327 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPS1P31327 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.83□□□□□ -1.64
CPS1P31327 AC063979.1-201ENST00000415539 377 ntBASIC4.83□□□□□ -1.64
CPS1P31327 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.83□□□□□ -1.64
CPS1P31327 OR6K4P-201ENST00000423179 955 ntBASIC4.83□□□□□ -1.64
CPS1P31327 AC092447.2-201ENST00000435487 669 ntBASIC4.83□□□□□ -1.64
CPS1P31327 S100A11P1-201ENST00000477525 312 ntBASIC4.83□□□□□ -1.64
CPS1P31327 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.83□□□□□ -1.64
CPS1P31327 AC025445.1-201ENST00000502728 300 ntBASIC4.83□□□□□ -1.64
CPS1P31327 YWHAEP4-201ENST00000505390 198 ntBASIC4.83□□□□□ -1.64
CPS1P31327 AC091826.1-201ENST00000514065 313 ntBASIC4.83□□□□□ -1.64
CPS1P31327 AC018442.3-201ENST00000523025 183 ntBASIC4.83□□□□□ -1.64
CPS1P31327 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPS1P31327 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.83□□□□□ -1.64
CPS1P31327 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.83□□□□□ -1.64
CPS1P31327 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.83□□□□□ -1.64
CPS1P31327 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPS1P31327 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.83□□□□□ -1.64
CPS1P31327 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.83□□□□□ -1.64
CPS1P31327 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.83□□□□□ -1.64
CPS1P31327 DDX6P1-205ENST00000441966 1436 ntBASIC4.82□□□□□ -1.64
CPS1P31327 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPS1P31327 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPS1P31327 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CPS1P31327 MIR93-201ENST00000385024 80 ntBASIC4.82□□□□□ -1.64
CPS1P31327 RSL24D1P1-201ENST00000404972 493 ntBASIC4.82□□□□□ -1.64
CPS1P31327 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.82□□□□□ -1.64
CPS1P31327 RPL35AP12-201ENST00000425362 338 ntBASIC4.82□□□□□ -1.64
CPS1P31327 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.82□□□□□ -1.64
CPS1P31327 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.82□□□□□ -1.64
CPS1P31327 HMGB3P22-202ENST00000451823 572 ntBASIC4.82□□□□□ -1.64
CPS1P31327 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.82□□□□□ -1.64
CPS1P31327 AC011270.1-201ENST00000558606 583 ntBASIC4.82□□□□□ -1.64
CPS1P31327 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPS1P31327 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPS1P31327 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CPS1P31327 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPS1P31327 SNORD74.4-201ENST00000364129 80 ntBASIC4.82□□□□□ -1.64
CPS1P31327 AL035407.1-201ENST00000429211 571 ntBASIC4.82□□□□□ -1.64
CPS1P31327 RPL23AP69-201ENST00000431134 458 ntBASIC4.82□□□□□ -1.64
CPS1P31327 AL133477.1-201ENST00000457472 514 ntBASIC4.82□□□□□ -1.64
CPS1P31327 AC084357.1-201ENST00000473404 255 ntBASIC4.82□□□□□ -1.64
CPS1P31327 NPM1P17-201ENST00000479221 602 ntBASIC4.82□□□□□ -1.64
CPS1P31327 RPL7P38-201ENST00000488396 739 ntBASIC4.82□□□□□ -1.64
CPS1P31327 AC103783.1-201ENST00000520506 373 ntBASIC4.82□□□□□ -1.64
CPS1P31327 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.82□□□□□ -1.64
CPS1P31327 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.82□□□□□ -1.64
CPS1P31327 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.82□□□□□ -1.64
CPS1P31327 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CPS1P31327 AC015802.5-201ENST00000607478 399 ntBASIC4.82□□□□□ -1.64
CPS1P31327 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPS1P31327 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.81□□□□□ -1.64
CPS1P31327 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CPS1P31327 AL078595.2-201ENST00000605309 1780 ntBASIC4.81□□□□□ -1.64
CPS1P31327 TNPO1P3-201ENST00000436471 2662 ntBASIC4.81□□□□□ -1.64
CPS1P31327 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.81□□□□□ -1.64
CPS1P31327 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.81□□□□□ -1.64
CPS1P31327 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPS1P31327 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.81□□□□□ -1.64
CPS1P31327 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPS1P31327 AF228730.2-201ENST00000438784 848 ntBASIC4.81□□□□□ -1.64
CPS1P31327 NPM1P13-201ENST00000452663 865 ntBASIC4.81□□□□□ -1.64
CPS1P31327 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPS1P31327 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.81□□□□□ -1.64
CPS1P31327 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.81□□□□□ -1.64
CPS1P31327 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.81□□□□□ -1.64
CPS1P31327 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.81□□□□□ -1.64
CPS1P31327 RNVU1-4-201ENST00000612985 164 ntBASIC4.81□□□□□ -1.64
CPS1P31327 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CPS1P31327 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.8□□□□□ -1.64
CPS1P31327 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CPS1P31327 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
CPS1P31327 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPS1P31327 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CPS1P31327 HSPA8P19-201ENST00000505359 1517 ntBASIC4.8□□□□□ -1.64
CPS1P31327 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms