Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC011270.1-201ENST00000558606 583 ntBASIC5.72□□□□□ -1.49
TOP2AP11388 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.72□□□□□ -1.49
TOP2AP11388 uc_338.25-201ENST00000613756 156 ntBASIC5.72□□□□□ -1.49
TOP2AP11388 AL356321.1-201ENST00000621360 228 ntBASIC5.72□□□□□ -1.49
TOP2AP11388 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TOP2AP11388 AC017071.1-201ENST00000564407 2204 ntBASIC5.72□□□□□ -1.49
TOP2AP11388 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.49
TOP2AP11388 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
TOP2AP11388 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.71□□□□□ -1.49
TOP2AP11388 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOP2AP11388 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOP2AP11388 AC073325.2-201ENST00000339545 159 ntBASIC5.71□□□□□ -1.5
TOP2AP11388 BX890604.2-201ENST00000427883 474 ntBASIC5.71□□□□□ -1.5
TOP2AP11388 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP2AP11388 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP2AP11388 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TOP2AP11388 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.71□□□□□ -1.5
TOP2AP11388 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.71□□□□□ -1.5
TOP2AP11388 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP2AP11388 BNIP3P38-201ENST00000601117 544 ntBASIC5.71□□□□□ -1.5
TOP2AP11388 AL162713.1-201ENST00000604480 262 ntBASIC5.71□□□□□ -1.5
TOP2AP11388 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP2AP11388 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TOP2AP11388 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TOP2AP11388 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.71□□□□□ -1.5
TOP2AP11388 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP2AP11388 CR381670.1-201ENST00000624291 1693 ntBASIC5.7□□□□□ -1.5
TOP2AP11388 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TOP2AP11388 OR5H2-201ENST00000355273 945 ntBASIC5.7□□□□□ -1.5
TOP2AP11388 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TOP2AP11388 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.7□□□□□ -1.5
TOP2AP11388 RNU6-729P-201ENST00000384399 107 ntBASIC5.7□□□□□ -1.5
TOP2AP11388 OR6K4P-201ENST00000423179 955 ntBASIC5.7□□□□□ -1.5
TOP2AP11388 ACTG1P13-201ENST00000486987 1043 ntBASIC5.7□□□□□ -1.5
TOP2AP11388 AC091826.1-201ENST00000514065 313 ntBASIC5.7□□□□□ -1.5
TOP2AP11388 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.7□□□□□ -1.5
TOP2AP11388 AC110801.1-201ENST00000623590 212 ntBASIC5.7□□□□□ -1.5
TOP2AP11388 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP2AP11388 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TOP2AP11388 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TOP2AP11388 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.7□□□□□ -1.5
TOP2AP11388 ANKRD36P1-201ENST00000344424 659 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 RNA5SP80-201ENST00000410475 111 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 AC007899.1-201ENST00000412776 775 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2AP11388 MIR4433B-201ENST00000581329 102 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2AP11388 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2AP11388 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.69□□□□□ -1.5
TOP2AP11388 MIR7106-201ENST00000612419 65 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 AL162574.2-201ENST00000614618 657 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2AP11388 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2AP11388 AL645568.2-201ENST00000432815 1337 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2AP11388 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TOP2AP11388 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TOP2AP11388 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TOP2AP11388 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP2AP11388 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP2AP11388 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 SCARNA20.6-201ENST00000517251 106 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.69□□□□□ -1.5
TOP2AP11388 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.69□□□□□ -1.5
TOP2AP11388 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2AP11388 AP005205.1-201ENST00000563503 508 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 UBL5P2-201ENST00000583788 219 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.69□□□□□ -1.5
TOP2AP11388 AC244517.3-201ENST00000616254 1235 ntBASIC5.69□□□□□ -1.5
TOP2AP11388 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
TOP2AP11388 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 AL031595.2-201ENST00000624215 19071 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2AP11388 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TOP2AP11388 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TOP2AP11388 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.68□□□□□ -1.5
TOP2AP11388 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
TOP2AP11388 AC126124.2-201ENST00000413542 321 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 MTND2P11-201ENST00000423638 648 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.68□□□□□ -1.5
TOP2AP11388 AC239809.1-201ENST00000450470 217 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 RPL21P8-201ENST00000465083 535 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.68□□□□□ -1.5
TOP2AP11388 AC103968.1-201ENST00000557841 573 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.68□□□□□ -1.5
TOP2AP11388 BMS1P21-201ENST00000634565 365 ntBASIC5.68□□□□□ -1.5
TOP2AP11388 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2AP11388 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
TOP2AP11388 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2AP11388 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TOP2AP11388 RNA5SP322-201ENST00000363617 119 ntBASIC5.67□□□□□ -1.5
TOP2AP11388 AL160275.2-201ENST00000412010 394 ntBASIC5.67□□□□□ -1.5
TOP2AP11388 DNAJC19P1-201ENST00000455312 319 ntBASIC5.67□□□□□ -1.5
TOP2AP11388 AC021205.2-201ENST00000480069 347 ntBASIC5.67□□□□□ -1.5
TOP2AP11388 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.67□□□□□ -1.5
TOP2AP11388 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.67□□□□□ -1.5
TOP2AP11388 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TOP2AP11388 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.67□□□□□ -1.5
TOP2AP11388 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.66□□□□□ -1.5
TOP2AP11388 SCN1A-220ENST00000641603 12506 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms