Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.09□□□□□ -1.91
FREM3P0C091 HIGD1AP1-201ENST00000550979 275 ntBASIC3.09□□□□□ -1.91
FREM3P0C091 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.09□□□□□ -1.91
FREM3P0C091 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.09□□□□□ -1.91
FREM3P0C091 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.09□□□□□ -1.91
FREM3P0C091 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.09□□□□□ -1.91
FREM3P0C091 AC105227.2-201ENST00000615075 605 ntBASIC3.09□□□□□ -1.91
FREM3P0C091 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FREM3P0C091 CEP170P1-201ENST00000502249 4587 ntBASIC3.09□□□□□ -1.92
FREM3P0C091 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
FREM3P0C091 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
FREM3P0C091 AL357075.1-201ENST00000404107 726 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 RNU6-55P-201ENST00000411092 107 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 RNU6-954P-201ENST00000411355 107 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.08□□□□□ -1.92
FREM3P0C091 BTF3P5-201ENST00000457252 467 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.08□□□□□ -1.92
FREM3P0C091 AGGF1P3-201ENST00000493675 1213 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 WBP1LP4-201ENST00000505043 344 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 MIR4738-201ENST00000579134 87 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.08□□□□□ -1.92
FREM3P0C091 AC015911.5-201ENST00000587076 451 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 MIR8057-201ENST00000620957 69 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.08□□□□□ -1.92
FREM3P0C091 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FREM3P0C091 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
FREM3P0C091 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
FREM3P0C091 MTCO1P12-201ENST00000414273 1543 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FREM3P0C091 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.08□□□□□ -1.92
FREM3P0C091 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.08□□□□□ -1.92
FREM3P0C091 AC073346.2-201ENST00000624724 2058 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FREM3P0C091 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FREM3P0C091 AC013470.3-201ENST00000420252 1194 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.08□□□□□ -1.92
FREM3P0C091 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.08□□□□□ -1.92
FREM3P0C091 CYCSP32-201ENST00000440548 321 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.08□□□□□ -1.92
FREM3P0C091 PRDX3P3-201ENST00000447765 522 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.08□□□□□ -1.92
FREM3P0C091 RPL7L1P1-201ENST00000448259 785 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
FREM3P0C091 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.08□□□□□ -1.92
FREM3P0C091 RNU2-27P-201ENST00000516185 142 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
FREM3P0C091 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.08□□□□□ -1.92
FREM3P0C091 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.08□□□□□ -1.92
FREM3P0C091 UBE2NP1-201ENST00000545592 458 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 MIR4276-201ENST00000584832 70 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.08□□□□□ -1.92
FREM3P0C091 AC015802.5-201ENST00000607478 399 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.08□□□□□ -1.92
FREM3P0C091 DDX18P3-201ENST00000404856 2007 ntBASIC3.08□□□□□ -1.92
FREM3P0C091 AL365440.1-201ENST00000436135 2167 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.07□□□□□ -1.92
FREM3P0C091 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.07□□□□□ -1.92
FREM3P0C091 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FREM3P0C091 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FREM3P0C091 RNU1-70P-201ENST00000362618 164 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 RNA5SP229-201ENST00000410809 99 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 RNA5SP31-201ENST00000411144 127 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.07□□□□□ -1.92
FREM3P0C091 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FREM3P0C091 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.07□□□□□ -1.92
FREM3P0C091 RBMY2UP-201ENST00000453474 324 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.07□□□□□ -1.92
FREM3P0C091 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.07□□□□□ -1.92
FREM3P0C091 FCF1P8-201ENST00000510322 597 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 RN7SKP57-201ENST00000517248 293 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.07□□□□□ -1.92
FREM3P0C091 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.07□□□□□ -1.92
FREM3P0C091 AC018442.3-201ENST00000523025 183 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AC103843.2-201ENST00000530523 682 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AC122134.1-201ENST00000565664 1104 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AC027281.1-201ENST00000574178 758 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
FREM3P0C091 CR382285.2-201ENST00000624662 1495 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FREM3P0C091 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.07□□□□□ -1.92
FREM3P0C091 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
FREM3P0C091 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.07□□□□□ -1.92
FREM3P0C091 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
FREM3P0C091 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FREM3P0C091 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.07□□□□□ -1.92
FREM3P0C091 RPL31P12-201ENST00000422587 358 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AC073387.1-201ENST00000453261 709 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 SNORD105B-201ENST00000458770 79 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.07□□□□□ -1.92
FREM3P0C091 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FREM3P0C091 MIR5680-201ENST00000577577 84 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AL033523.1-201ENST00000605153 153 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 AC110741.2-201ENST00000605278 268 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
FREM3P0C091 MTND5P1-201ENST00000445440 1375 ntBASIC3.07□□□□□ -1.92
FREM3P0C091 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
FREM3P0C091 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
FREM3P0C091 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms