Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NDUFA5P12-201ENST00000503796 343 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL1P09341 AP001960.1-201ENST00000506494 658 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL1P09341 RN7SKP21-201ENST00000516503 220 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL1P09341 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL1P09341 LECT2-205ENST00000522943 574 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL1P09341 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.74□□□□□ -1.97
CXCL1P09341 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL1P09341 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL1P09341 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC2.74□□□□□ -1.97
CXCL1P09341 MIR5096-201ENST00000583713 70 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC234771.5-201ENST00000600161 514 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 RNU4-89P-201ENST00000607443 133 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 AC114781.5-201ENST00000615297 108 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CXCL1P09341 MIR7703-201ENST00000620784 77 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 AC073530.2-201ENST00000623987 261 ntBASIC2.74□□□□□ -1.97
CXCL1P09341 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.74□□□□□ -1.97
CXCL1P09341 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CXCL1P09341 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CXCL1P09341 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 AF127577.6-201ENST00000623352 2191 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.73□□□□□ -1.97
CXCL1P09341 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 RPS27AP11-201ENST00000402798 447 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 RN7SKP123-201ENST00000410732 291 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 AC007899.1-201ENST00000412776 775 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 AC244505.4-201ENST00000434905 287 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 MTCYBP29-201ENST00000436327 1006 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 CYCSP43-201ENST00000438233 310 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 AL772161.1-201ENST00000439130 476 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 SSXP5-201ENST00000443473 287 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 GAPDHP27-201ENST00000447427 1020 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC2.73□□□□□ -1.97
CXCL1P09341 RPS20P32-201ENST00000456044 356 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 RPL23AP12-201ENST00000467573 473 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL1P09341 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.73□□□□□ -1.97
CXCL1P09341 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL1P09341 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.73□□□□□ -1.97
CXCL1P09341 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.73□□□□□ -1.97
CXCL1P09341 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 AP004242.1-201ENST00000533701 349 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.73□□□□□ -1.97
CXCL1P09341 AC023161.2-201ENST00000551218 780 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 OR4U1P-201ENST00000554958 912 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC2.73□□□□□ -1.97
CXCL1P09341 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL1P09341 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL1P09341 AL355816.1-201ENST00000607951 118 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC2.73□□□□□ -1.97
CXCL1P09341 MIR6719-201ENST00000622428 87 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 MTND5P7-201ENST00000413558 1798 ntBASIC2.73□□□□□ -1.97
CXCL1P09341 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.73□□□□□ -1.97
CXCL1P09341 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CXCL1P09341 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CXCL1P09341 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL1P09341 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL1P09341 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.72□□□□□ -1.97
CXCL1P09341 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL1P09341 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.72□□□□□ -1.97
CXCL1P09341 SNORA48.8-201ENST00000391324 134 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL1P09341 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CXCL1P09341 TRIAP1P1-201ENST00000427062 225 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 RPL23AP82-202ENST00000427528 469 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.72□□□□□ -1.97
CXCL1P09341 AL357552.1-201ENST00000445254 415 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 PPIAP3-201ENST00000450588 505 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 RN7SL75P-201ENST00000461926 281 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 CENPBD1P1-201ENST00000464061 469 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 RPL7P5-201ENST00000471472 736 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.72□□□□□ -1.97
CXCL1P09341 AC093720.1-201ENST00000505681 714 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.72□□□□□ -1.97
CXCL1P09341 RNU2-27P-201ENST00000516185 142 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 RNU1-143P-201ENST00000516296 146 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL1P09341 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC2.72□□□□□ -1.97
CXCL1P09341 OR4A2P-201ENST00000527276 913 ntBASIC2.72□□□□□ -1.97
CXCL1P09341 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CXCL1P09341 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms