Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ACTG1P13-201ENST00000486987 1043 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 RPS3AP50-201ENST00000487064 803 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 SMARCE1P4-201ENST00000523647 241 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 RFPL1S-203ENST00000539579 330 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 YPEL5P3-201ENST00000547227 352 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL121594.4-201ENST00000556211 1196 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 TGIF1P1-201ENST00000558095 802 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC006960.3-201ENST00000561845 705 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC015726.1-201ENST00000602353 681 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL354760.1-201ENST00000608357 643 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL096803.3-201ENST00000609032 532 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC004825.2-201ENST00000616634 455 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AP003072.4-201ENST00000624580 310 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AC016717.3-201ENST00000624730 554 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 HPVC1-201ENST00000629899 1198 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 MIR7153-201ENST00000637758 57 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 AL163152.1-201ENST00000642001 374 ntBASIC3.34□□□□□ -1.87
HLA-DPB1P04440 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HLA-DPB1P04440 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HLA-DPB1P04440 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.34□□□□□ -1.88
HLA-DPB1P04440 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.34□□□□□ -1.88
HLA-DPB1P04440 RIOK3P1-201ENST00000418778 1528 ntBASIC3.34□□□□□ -1.88
HLA-DPB1P04440 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC074029.4-201ENST00000624796 1859 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 RN7SKP227-201ENST00000364445 330 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AL136116.1-201ENST00000403591 381 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 UBE2V1P15-201ENST00000407776 448 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 XKRYP4-201ENST00000414395 483 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 LINC01347-201ENST00000417964 355 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 FAM204CP-201ENST00000424489 642 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AL138785.1-201ENST00000425821 331 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 FAR1P1-201ENST00000427163 934 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AL031663.1-201ENST00000437445 219 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 XKRYP5-201ENST00000449659 483 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC099563.1-201ENST00000456086 418 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 RPS3AP6-201ENST00000484430 795 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 TPT1P3-201ENST00000492841 512 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 NDUFA5P2-201ENST00000519723 344 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC090819.1-201ENST00000523800 1111 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AP002812.4-201ENST00000532139 286 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 OR8R1P-201ENST00000543943 764 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC135001.1-201ENST00000544546 283 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC093014.1-201ENST00000548926 724 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC115085.1-201ENST00000588924 229 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 OR4H6P-202ENST00000603819 340 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AL163642.2-201ENST00000604722 1019 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AL391261.4-201ENST00000616012 481 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AC009318.3-201ENST00000616916 503 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 AL353743.4-201ENST00000422653 1547 ntBASIC3.33□□□□□ -1.88
HLA-DPB1P04440 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DPB1P04440 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 RNU6-252P-201ENST00000363232 107 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 RNA5SP97-201ENST00000365006 84 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AL450992.3-201ENST00000413192 568 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 LIPT1P1-201ENST00000415870 1186 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 TCEA1P2-201ENST00000420496 906 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AL158071.1-201ENST00000430315 461 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AL035458.1-201ENST00000433096 585 ntBASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DPB1P04440 AC007000.2-201ENST00000442564 487 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms