Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1BO75841 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1BO75841 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1BO75841 AL592148.3-201ENST00000608771 2646 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1BO75841 DNAJC19P6-201ENST00000401853 280 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 RNU4-25P-201ENST00000410569 230 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1BO75841 VTA1P1-201ENST00000414044 866 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 AL513174.1-201ENST00000423182 629 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 FAR2P4-202ENST00000425399 584 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1BO75841 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC069540.1-201ENST00000446320 988 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1BO75841 PPIAP3-201ENST00000450588 505 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 MTND3P4-201ENST00000453537 303 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 RN7SL810P-201ENST00000493031 276 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 AC108078.3-201ENST00000502633 489 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 POU5F1P7-201ENST00000508759 541 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UPK1BO75841 PTGES3P3-201ENST00000511479 482 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK1BO75841 RN7SKP277-201ENST00000516895 283 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 RNA5SP179-201ENST00000517284 121 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC008562.1-201ENST00000521763 330 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.17□□□□□ -1.9
UPK1BO75841 OR8G5-201ENST00000524943 1041 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1BO75841 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1BO75841 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.17□□□□□ -1.9
UPK1BO75841 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC005191.1-201ENST00000603950 358 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 SNORA62.6-201ENST00000606322 83 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1BO75841 AC016717.3-201ENST00000624730 554 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK1BO75841 AL049767.1-202ENST00000637826 242 ntBASIC3.17□□□□□ -1.9
UPK1BO75841 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK1BO75841 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
UPK1BO75841 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1BO75841 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 ELL2P4-201ENST00000446870 1376 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
UPK1BO75841 U3.11-201ENST00000364476 212 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 SNORA51.8-201ENST00000384234 132 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK1BO75841 RPS15AP40-201ENST00000419621 391 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 OR4F13P-201ENST00000428478 931 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 RPS7P5-201ENST00000441482 581 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 HMGN2P21-201ENST00000447764 270 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.16□□□□□ -1.9
UPK1BO75841 HMGB3P30-201ENST00000457863 606 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AC010326.1-201ENST00000462726 602 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 RN7SL629P-201ENST00000489622 285 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 RPL7P51-201ENST00000490532 749 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AP000563.1-201ENST00000490865 758 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 RNU2-27P-201ENST00000516185 142 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 OR5AK3P-201ENST00000527486 1297 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 OR5D17P-201ENST00000531492 978 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
UPK1BO75841 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC006270.2-201ENST00000578523 652 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC018618.2-201ENST00000604770 446 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC011374.2-201ENST00000607135 526 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC011944.2-201ENST00000624440 683 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.16□□□□□ -1.9
UPK1BO75841 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
UPK1BO75841 U6.107-201ENST00000637108 79 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AC025125.1-201ENST00000624743 1922 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 AC022031.1-201ENST00000585985 2593 ntBASIC3.16□□□□□ -1.9
UPK1BO75841 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
UPK1BO75841 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms