Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 RN7SL346P-201ENST00000491561 294 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 KLRA1P-201ENST00000503499 986 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC004069.2-201ENST00000505438 1114 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC025674.1-201ENST00000507074 324 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS4BO75351 RN7SKP46-201ENST00000515942 234 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 RNU6-941P-201ENST00000516346 108 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 SNORA48.10-201ENST00000516965 160 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC060788.1-201ENST00000521318 469 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4BO75351 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.94□□□□□ -1.62
VPS4BO75351 AP000873.5-201ENST00000533906 236 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC063949.1-201ENST00000552900 865 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 RPL10P14-201ENST00000565265 298 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC006362.1-201ENST00000567392 174 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC012435.1-202ENST00000568772 240 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 ZNF415P1-201ENST00000582279 1166 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 DEFB131E-202ENST00000602581 683 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 MTCYBP22-201ENST00000603788 447 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC092354.2-201ENST00000607786 514 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AL354760.1-201ENST00000608357 643 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 AC092650.2-201ENST00000619984 902 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC091905.4-201ENST00000623432 202 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 CYP4F35P-202ENST00000636121 390 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS4BO75351 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
VPS4BO75351 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VPS4BO75351 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.94□□□□□ -1.62
VPS4BO75351 AC092162.3-201ENST00000624511 1624 ntBASIC4.94□□□□□ -1.62
VPS4BO75351 AC107068.1-201ENST00000563286 4218 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4BO75351 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4BO75351 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
VPS4BO75351 MAPK10-263ENST00000641052 4307 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 SNORA2.3-201ENST00000383920 135 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4BO75351 AL359643.1-201ENST00000404109 423 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 Y_RNA.619-201ENST00000410951 90 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AL136133.1-201ENST00000413694 376 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 MTCYBP38-201ENST00000417160 1123 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC233981.1-201ENST00000423224 461 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4BO75351 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4BO75351 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4BO75351 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4BO75351 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.93□□□□□ -1.62
VPS4BO75351 B3GNT2P1-201ENST00000434960 952 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 RPS26P40-201ENST00000435209 294 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AL137845.2-201ENST00000444292 988 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4BO75351 USP9YP10-201ENST00000454868 628 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 RPL18AP17-201ENST00000455326 198 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 RPS29P33-201ENST00000456717 146 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 RN7SL443P-201ENST00000464331 290 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 SNX5P1-201ENST00000505757 1041 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 HMGB1P28-201ENST00000507778 552 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC093281.2-201ENST00000510153 597 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 GTF2F2P1-201ENST00000511083 675 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC079140.3-201ENST00000511111 550 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC010625.1-201ENST00000511296 403 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 USP9YP5-201ENST00000511770 630 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC091965.2-201ENST00000512324 613 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4BO75351 AC004980.4-201ENST00000513375 203 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 ENPP7P9-201ENST00000514456 627 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 snoU109.6-201ENST00000516831 118 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS4BO75351 SLC2A13P1-201ENST00000531560 322 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC022880.1-201ENST00000534017 973 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.93□□□□□ -1.62
VPS4BO75351 AL136363.2-201ENST00000604173 851 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC025594.3-201ENST00000613068 790 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC009704.2-201ENST00000618739 483 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS4BO75351 AL590240.3-201ENST00000621416 943 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC018816.2-201ENST00000621460 353 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC099494.2-201ENST00000623371 978 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
VPS4BO75351 MIR7641-1-201ENST00000627518 61 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 AC006927.3-201ENST00000638789 384 ntBASIC4.93□□□□□ -1.62
VPS4BO75351 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4BO75351 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS4BO75351 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS4BO75351 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms