Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 EIF1P6-201ENST00000600054 334 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 AL390816.3-201ENST00000604527 1066 ntBASIC3.78□□□□□ -1.8
LSM1O15116 RNA5SP108-201ENST00000605921 117 ntBASIC3.78□□□□□ -1.8
LSM1O15116 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.78□□□□□ -1.8
LSM1O15116 AC121761.2-201ENST00000617300 689 ntBASIC3.78□□□□□ -1.8
LSM1O15116 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.78□□□□□ -1.8
LSM1O15116 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.78□□□□□ -1.8
LSM1O15116 AL021368.2-201ENST00000606125 5352 ntBASIC3.78□□□□□ -1.8
LSM1O15116 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSM1O15116 ZNF33CP-201ENST00000432492 2030 ntBASIC3.78□□□□□ -1.8
LSM1O15116 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.78□□□□□ -1.8
LSM1O15116 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
LSM1O15116 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LSM1O15116 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 RAD1P1-201ENST00000231383 813 ntBASIC3.77□□□□□ -1.81
LSM1O15116 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 RNU1-18P-201ENST00000363062 164 ntBASIC3.77□□□□□ -1.81
LSM1O15116 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LSM1O15116 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM1O15116 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM1O15116 MIR937-201ENST00000401271 86 ntBASIC3.77□□□□□ -1.81
LSM1O15116 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LSM1O15116 RN7SKP285-201ENST00000410137 318 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AC016769.2-201ENST00000414815 475 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AC234782.4-201ENST00000417646 1048 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.77□□□□□ -1.81
LSM1O15116 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM1O15116 MRPL50P1-201ENST00000431951 384 ntBASIC3.77□□□□□ -1.81
LSM1O15116 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AC092809.1-201ENST00000441469 474 ntBASIC3.77□□□□□ -1.81
LSM1O15116 RPS7P5-201ENST00000441482 581 ntBASIC3.77□□□□□ -1.81
LSM1O15116 MTCO3P16-201ENST00000454456 754 ntBASIC3.77□□□□□ -1.81
LSM1O15116 RPS20P21-201ENST00000466859 343 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AP002884.2-201ENST00000471647 395 ntBASIC3.77□□□□□ -1.81
LSM1O15116 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM1O15116 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.77□□□□□ -1.81
LSM1O15116 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.77□□□□□ -1.81
LSM1O15116 PHBP14-201ENST00000512887 367 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM1O15116 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM1O15116 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 AC009643.1-201ENST00000532030 391 ntBASIC3.77□□□□□ -1.81
LSM1O15116 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 YPEL5P3-201ENST00000547227 352 ntBASIC3.77□□□□□ -1.81
LSM1O15116 NOP56P3-201ENST00000549457 385 ntBASIC3.77□□□□□ -1.81
LSM1O15116 POLR2KP1-201ENST00000553226 168 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.77□□□□□ -1.81
LSM1O15116 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.77□□□□□ -1.81
LSM1O15116 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.77□□□□□ -1.81
LSM1O15116 SUMO2P14-201ENST00000604488 293 ntBASIC3.77□□□□□ -1.81
LSM1O15116 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 MIR6820-201ENST00000611508 62 ntBASIC3.77□□□□□ -1.81
LSM1O15116 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM1O15116 MIR6864-201ENST00000617935 70 ntBASIC3.77□□□□□ -1.81
LSM1O15116 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSM1O15116 AL445567.2-201ENST00000618935 498 ntBASIC3.77□□□□□ -1.81
LSM1O15116 AC006065.5-201ENST00000623427 349 ntBASIC3.77□□□□□ -1.81
LSM1O15116 CDRT1-208ENST00000630868 794 ntBASIC3.77□□□□□ -1.81
LSM1O15116 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.77□□□□□ -1.81
LSM1O15116 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LSM1O15116 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LSM1O15116 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.76□□□□□ -1.81
LSM1O15116 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.76□□□□□ -1.81
LSM1O15116 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LSM1O15116 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LSM1O15116 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.76□□□□□ -1.81
LSM1O15116 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LSM1O15116 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
LSM1O15116 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.76□□□□□ -1.81
LSM1O15116 AL590704.1-201ENST00000402856 794 ntBASIC3.76□□□□□ -1.81
LSM1O15116 TBCAP1-201ENST00000436520 327 ntBASIC3.76□□□□□ -1.81
LSM1O15116 RPL7P29-201ENST00000437151 728 ntBASIC3.76□□□□□ -1.81
LSM1O15116 SETP5-201ENST00000437270 562 ntBASIC3.76□□□□□ -1.81
LSM1O15116 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.76□□□□□ -1.81
LSM1O15116 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.76□□□□□ -1.81
LSM1O15116 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.76□□□□□ -1.81
LSM1O15116 RANP8-201ENST00000444720 713 ntBASIC3.76□□□□□ -1.81
LSM1O15116 TPTE2P6-202ENST00000445572 1007 ntBASIC3.76□□□□□ -1.81
LSM1O15116 HMGN2P21-201ENST00000447764 270 ntBASIC3.76□□□□□ -1.81
LSM1O15116 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.76□□□□□ -1.81
LSM1O15116 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.76□□□□□ -1.81
LSM1O15116 AC104689.1-201ENST00000473356 768 ntBASIC3.76□□□□□ -1.81
LSM1O15116 AC004069.2-201ENST00000505438 1114 ntBASIC3.76□□□□□ -1.81
LSM1O15116 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.76□□□□□ -1.81
LSM1O15116 AC106806.2-201ENST00000509365 500 ntBASIC3.76□□□□□ -1.81
LSM1O15116 AC008494.2-201ENST00000514544 370 ntBASIC3.76□□□□□ -1.81
LSM1O15116 SNORA31.13-201ENST00000516624 135 ntBASIC3.76□□□□□ -1.81
LSM1O15116 RN7SKP234-201ENST00000517173 224 ntBASIC3.76□□□□□ -1.81
LSM1O15116 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.76□□□□□ -1.81
LSM1O15116 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.76□□□□□ -1.81
LSM1O15116 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.76□□□□□ -1.81
LSM1O15116 IGHV3-76-201ENST00000522465 295 ntBASIC3.76□□□□□ -1.81
LSM1O15116 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.76□□□□□ -1.81
LSM1O15116 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.76□□□□□ -1.81
LSM1O15116 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.76□□□□□ -1.81
LSM1O15116 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms