Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC022031.1-201ENST00000585985 2593 ntBASIC6.03□□□□□ -1.44
CUX2O14529 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CUX2O14529 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.03□□□□□ -1.44
CUX2O14529 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CUX2O14529 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CUX2O14529 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
CUX2O14529 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
CUX2O14529 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.02□□□□□ -1.44
CUX2O14529 AC069285.2-201ENST00000440210 275 ntBASIC6.02□□□□□ -1.44
CUX2O14529 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC6.02□□□□□ -1.44
CUX2O14529 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.02□□□□□ -1.44
CUX2O14529 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
CUX2O14529 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.02□□□□□ -1.45
CUX2O14529 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.02□□□□□ -1.45
CUX2O14529 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CUX2O14529 MIR513A2-201ENST00000385249 127 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AL391417.1-201ENST00000404100 426 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AL160275.2-201ENST00000412010 394 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.02□□□□□ -1.45
CUX2O14529 BX119904.1-201ENST00000432026 348 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AC006480.1-201ENST00000449887 378 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.02□□□□□ -1.45
CUX2O14529 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.02□□□□□ -1.45
CUX2O14529 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CUX2O14529 IGKV2-26-201ENST00000518305 343 ntBASIC6.02□□□□□ -1.45
CUX2O14529 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.02□□□□□ -1.45
CUX2O14529 GTF3AP2-201ENST00000557014 266 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AL139395.1-201ENST00000603662 160 ntBASIC6.02□□□□□ -1.45
CUX2O14529 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AC012603.1-201ENST00000606424 528 ntBASIC6.02□□□□□ -1.45
CUX2O14529 AC009159.1-201ENST00000618386 642 ntBASIC6.02□□□□□ -1.45
CUX2O14529 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
CUX2O14529 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CUX2O14529 RNU1-18P-201ENST00000363062 164 ntBASIC6.01□□□□□ -1.45
CUX2O14529 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.01□□□□□ -1.45
CUX2O14529 SETP15-201ENST00000412724 337 ntBASIC6.01□□□□□ -1.45
CUX2O14529 AC013410.1-201ENST00000436223 1232 ntBASIC6.01□□□□□ -1.45
CUX2O14529 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC6.01□□□□□ -1.45
CUX2O14529 IGHV3-63-201ENST00000518422 341 ntBASIC6.01□□□□□ -1.45
CUX2O14529 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.01□□□□□ -1.45
CUX2O14529 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC6.01□□□□□ -1.45
CUX2O14529 AL096803.3-201ENST00000609032 532 ntBASIC6.01□□□□□ -1.45
CUX2O14529 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.01□□□□□ -1.45
CUX2O14529 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CUX2O14529 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CUX2O14529 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUX2O14529 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CUX2O14529 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUX2O14529 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CUX2O14529 SDCBPP2-201ENST00000424643 885 ntBASIC6□□□□□ -1.45
CUX2O14529 RPL35AP12-201ENST00000425362 338 ntBASIC6□□□□□ -1.45
CUX2O14529 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6□□□□□ -1.45
CUX2O14529 RPL5P30-201ENST00000465511 891 ntBASIC6□□□□□ -1.45
CUX2O14529 UBA52P3-201ENST00000491303 382 ntBASIC6□□□□□ -1.45
CUX2O14529 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6□□□□□ -1.45
CUX2O14529 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
CUX2O14529 AC092435.4-201ENST00000623012 4159 ntBASIC6□□□□□ -1.45
CUX2O14529 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CUX2O14529 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.99□□□□□ -1.45
CUX2O14529 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.99□□□□□ -1.45
CUX2O14529 OR5J1P-201ENST00000313544 939 ntBASIC5.99□□□□□ -1.45
CUX2O14529 SNORD74.4-201ENST00000364129 80 ntBASIC5.99□□□□□ -1.45
CUX2O14529 MIR887-201ENST00000401258 79 ntBASIC5.99□□□□□ -1.45
CUX2O14529 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUX2O14529 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.99□□□□□ -1.45
CUX2O14529 RPS26P15-201ENST00000488067 348 ntBASIC5.99□□□□□ -1.45
CUX2O14529 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.99□□□□□ -1.45
CUX2O14529 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.99□□□□□ -1.45
CUX2O14529 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC5.99□□□□□ -1.45
CUX2O14529 AL359535.1-201ENST00000612100 1087 ntBASIC5.99□□□□□ -1.45
CUX2O14529 AC018692.3-201ENST00000623929 123 ntBASIC5.99□□□□□ -1.45
CUX2O14529 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CUX2O14529 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CUX2O14529 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CUX2O14529 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.98□□□□□ -1.45
CUX2O14529 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.98□□□□□ -1.45
CUX2O14529 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 AC062016.1-201ENST00000355719 319 ntBASIC5.98□□□□□ -1.45
CUX2O14529 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.98□□□□□ -1.45
CUX2O14529 ATP5HP2-201ENST00000433885 485 ntBASIC5.98□□□□□ -1.45
CUX2O14529 AC000041.1-201ENST00000439655 175 ntBASIC5.98□□□□□ -1.45
CUX2O14529 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.98□□□□□ -1.45
CUX2O14529 MYL12AP1-201ENST00000518490 515 ntBASIC5.98□□□□□ -1.45
CUX2O14529 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 AC023161.2-201ENST00000551218 780 ntBASIC5.98□□□□□ -1.45
CUX2O14529 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.98□□□□□ -1.45
CUX2O14529 AC018690.1-201ENST00000608144 626 ntBASIC5.98□□□□□ -1.45
CUX2O14529 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.98□□□□□ -1.45
CUX2O14529 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.98□□□□□ -1.45
CUX2O14529 U4.6-201ENST00000621618 127 ntBASIC5.98□□□□□ -1.45
CUX2O14529 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CUX2O14529 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CUX2O14529 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.97□□□□□ -1.45
CUX2O14529 TRBV12-1-201ENST00000479785 344 ntBASIC5.97□□□□□ -1.45
CUX2O14529 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms