Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 YPEL5P3-201ENST00000547227 352 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC025260.1-201ENST00000548858 430 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AL139395.1-201ENST00000603662 160 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC112230.1-201ENST00000604342 547 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AL031666.3-201ENST00000609320 1006 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC039056.2-201ENST00000622261 511 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC124312.6-202ENST00000623624 418 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC073530.2-201ENST00000623987 261 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 AC112200.1-201ENST00000625015 234 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 MIR6715B-201ENST00000637172 77 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 OR8B1P-202ENST00000641132 1178 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 Z73965.1-201ENST00000623412 2297 ntBASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
NEDD8-MDP1E9PL57 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 RNF6P1-201ENST00000444889 1784 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-543P-201ENST00000362576 108 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-304P-201ENST00000364855 107 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AL603766.1-201ENST00000407763 664 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC073310.1-201ENST00000423226 1033 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 GOT2P5-201ENST00000433995 546 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 HLA-N-201ENST00000437516 135 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC099063.2-201ENST00000446360 662 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 RN7SL271P-201ENST00000487601 295 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC006499.6-201ENST00000511169 607 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC018797.3-201ENST00000513388 1241 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC093853.1-201ENST00000515689 483 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 NDUFA5P2-201ENST00000519723 344 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC019227.1-201ENST00000526902 510 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC022968.1-201ENST00000567372 442 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC007599.1-201ENST00000568688 1174 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 AC008638.3-201ENST00000603341 463 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 FRG1HP-204ENST00000617940 757 ntBASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
NEDD8-MDP1E9PL57 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 RNA5SP124-201ENST00000362739 110 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU6-317P-201ENST00000384031 107 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 RNA5SP171-201ENST00000391071 115 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 HMGB3P18-201ENST00000406327 590 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC008173.1-201ENST00000418901 264 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 FO393414.1-201ENST00000428697 1184 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 CBX1P4-201ENST00000439415 457 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 NOTCH2P1-201ENST00000443481 624 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 RANP8-201ENST00000444720 713 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 VN1R34P-201ENST00000447387 883 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AL133547.1-201ENST00000448546 220 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC104306.1-201ENST00000449702 371 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 RPL21P11-201ENST00000461458 483 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 ACTR3P3-201ENST00000480448 893 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 RNU5A-7P-201ENST00000515979 116 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AC133794.1-201ENST00000602731 914 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 AL139286.1-201ENST00000604465 483 ntBASIC4.03□□□□□ -1.76
NEDD8-MDP1E9PL57 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms