Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 IGKV3D-34-201ENST00000522638 302 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AF279873.1-201ENST00000523393 313 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AP003717.3-201ENST00000544832 1180 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AC006254.3-201ENST00000603353 884 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AL451044.1-201ENST00000604867 238 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AC092653.1-201ENST00000608509 531 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AC022079.2-201ENST00000619739 566 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AC092628.2-201ENST00000622492 339 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AL109659.3-201ENST00000624985 950 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AL356118.1-201ENST00000635272 1078 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
KCNIP3Q9Y2W7 AL353746.1-201ENST00000566293 6881 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC016716.1-201ENST00000265882 708 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RNU6-481P-201ENST00000384194 107 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 BTBD10P2-201ENST00000404779 676 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RPL30P2-201ENST00000414021 291 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 P2RY10P2-201ENST00000416730 913 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC002069.1-201ENST00000429649 1159 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 UBE2V1P1-201ENST00000430836 445 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RPL17P35-201ENST00000432217 549 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC092170.1-201ENST00000440211 356 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RPL6P5-201ENST00000445678 828 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 EIF2S2P2-201ENST00000447161 982 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC144530.1-201ENST00000452862 555 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RN7SL93P-201ENST00000463035 293 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RPL21P126-201ENST00000470049 478 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RPS27P23-201ENST00000487608 251 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RPL29P14-201ENST00000495837 428 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC008953.1-201ENST00000497334 318 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 UBE2CP3-201ENST00000502715 450 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC093763.2-201ENST00000505334 1223 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC004069.2-201ENST00000505438 1114 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 BTF3L4P4-201ENST00000506381 449 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RNU7-143P-201ENST00000516781 65 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC093331.1-201ENST00000521474 169 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 HIGD1AP10-201ENST00000527837 282 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 MIR4489-201ENST00000578869 62 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC020910.2-201ENST00000603635 610 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 BNIP3P4-201ENST00000604946 565 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 AL132640.2-201ENST00000559968 1698 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 C4BPAP1-201ENST00000415474 1893 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 UBE3AP2-201ENST00000429033 2259 ntBASIC3.39□□□□□ -1.87
KCNIP3Q9Y2W7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC026951.1-201ENST00000559530 2459 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AL512283.1-201ENST00000606756 1384 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC000367.1-201ENST00000452711 1766 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 MTCO1P4-201ENST00000520516 1409 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 SNORD35B-201ENST00000363660 87 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 RNU6-1151P-201ENST00000384684 107 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 HMGN2P8-201ENST00000391458 268 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 PTGES3P2-201ENST00000407942 482 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 TMSB10P2-201ENST00000416049 131 ntBASIC3.38□□□□□ -1.87
KCNIP3Q9Y2W7 AC127526.1-201ENST00000417526 366 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms