Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC104383.1-201ENST00000530297 370 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 TOMM20P2-201ENST00000540082 421 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC136624.4-201ENST00000573044 370 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 FGF7P1-201ENST00000582820 288 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AP000907.4-201ENST00000604143 237 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC005332.6-201ENST00000613178 446 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC004009.2-201ENST00000623016 728 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 FAM157B-203ENST00000639350 358 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AL354685.2-201ENST00000448218 1447 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 AC006210.2-201ENST00000367074 1545 ntBASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDLIM7Q9NR12 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RNU6-619P-201ENST00000365146 108 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 SNORA70.6-201ENST00000383934 134 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RNU1-74P-201ENST00000384108 171 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RNU2-41P-201ENST00000410991 178 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 OR51A3P-201ENST00000413596 924 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC138393.2-201ENST00000414742 246 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MTCYBP24-201ENST00000420387 1106 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RPL7P30-201ENST00000420888 709 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC233728.2-201ENST00000425348 757 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RPL18P10-201ENST00000425606 538 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AL512649.1-201ENST00000428997 581 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MTCO3P21-201ENST00000430791 643 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RPL21P110-201ENST00000433345 446 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 BTF3P10-201ENST00000433415 495 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MTCO3P18-201ENST00000440206 761 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AL022238.1-201ENST00000442557 355 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 KNOP1P3-201ENST00000446933 426 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 PDSS1P2-201ENST00000449397 678 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 SNORD42A-201ENST00000459584 64 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RPS23P7-201ENST00000466210 444 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC026979.1-201ENST00000492525 396 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RPL7P24-201ENST00000493052 752 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 RPS27AP18-201ENST00000515536 459 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 HMGB1P23-201ENST00000518743 568 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC087276.1-201ENST00000529659 480 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AP001004.1-201ENST00000582468 324 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC005730.3-201ENST00000583067 366 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC006504.3-201ENST00000586818 523 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MEMO1P5-201ENST00000604810 406 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AL158211.4-201ENST00000606988 584 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AP005432.2-201ENST00000608162 586 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC104458.1-201ENST00000608243 463 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MIR7973-1-201ENST00000614683 76 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AL121890.2-201ENST00000617644 465 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MIR6839-201ENST00000620425 113 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 AP000648.2-201ENST00000624182 404 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 MTND4P23-201ENST00000447723 1363 ntBASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.78□□□□□ -1.48
PDLIM7Q9NR12 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
PDLIM7Q9NR12 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PDLIM7Q9NR12 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PDLIM7Q9NR12 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PDLIM7Q9NR12 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.77□□□□□ -1.49
PDLIM7Q9NR12 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms