Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC105402.1-201ENST00000413336 545 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 XKRYP1-201ENST00000423438 492 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 XKRYP2-201ENST00000432915 492 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AL353093.1-201ENST00000441292 436 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AL035407.2-201ENST00000454090 378 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC134050.1-201ENST00000495088 933 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 RFPL4AP5-201ENST00000514977 504 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 RN7SKP122-201ENST00000515923 296 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 RNU6-311P-201ENST00000516224 102 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 SNORA31.9-201ENST00000516429 84 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 NDUFS5P6-201ENST00000529136 295 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC139103.1-201ENST00000534696 1030 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC008083.2-201ENST00000546707 476 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC022022.2-201ENST00000602989 360 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 MIR6716-201ENST00000613413 80 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AL158196.1-201ENST00000616786 434 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC007342.8-201ENST00000623278 678 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC145207.9-201ENST00000623802 325 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 MIR6830-201ENST00000636015 70 ntBASIC4.22□□□□□ -1.73
SIX2Q9NPC8 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SIX2Q9NPC8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
SIX2Q9NPC8 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SIX2Q9NPC8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC068538.1-201ENST00000376856 336 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 MCTS2P-201ENST00000394552 546 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AL022722.2-201ENST00000402519 180 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 RNA5SP317-201ENST00000410176 116 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 RN7SKP222-201ENST00000410651 315 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 RNA5SP311-201ENST00000411290 116 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 EIF4A1P3-201ENST00000411521 244 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 HIGD1AP15-201ENST00000416198 280 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AL691449.1-201ENST00000426570 421 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 GTF2IP3-201ENST00000433887 494 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 Z74696.2-201ENST00000436514 498 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC092155.2-201ENST00000454675 477 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 MTCO3P35-201ENST00000485582 781 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 RPL21P131-201ENST00000497298 483 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC093890.1-201ENST00000502554 540 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC010342.1-201ENST00000514047 877 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 RNA5SP315-201ENST00000516340 116 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 RNA5SP312-201ENST00000517068 116 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC104417.1-201ENST00000523974 751 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 LRRC6P1-201ENST00000532188 885 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC006386.1-201ENST00000619436 415 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SIX2Q9NPC8 MFSD8-220ENST00000641243 1422 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AL355578.1-201ENST00000607405 1328 ntBASIC4.21□□□□□ -1.74
SIX2Q9NPC8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 RLIMP2-201ENST00000427891 1563 ntBASIC4.2□□□□□ -1.74
SIX2Q9NPC8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.2□□□□□ -1.74
SIX2Q9NPC8 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 AF228730.1-201ENST00000397972 663 ntBASIC4.2□□□□□ -1.74
SIX2Q9NPC8 DNAJC19P6-201ENST00000401853 280 ntBASIC4.2□□□□□ -1.74
SIX2Q9NPC8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 RPL21P65-201ENST00000406094 466 ntBASIC4.2□□□□□ -1.74
SIX2Q9NPC8 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.2□□□□□ -1.74
SIX2Q9NPC8 PTGES3P1-201ENST00000439531 483 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms