Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 HMGB3P20-201ENST00000417997 600 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC004690.1-201ENST00000418216 328 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RNF10P1-201ENST00000418589 369 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL158073.1-201ENST00000426848 1104 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RPL12P18-201ENST00000437175 325 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MED28P3-201ENST00000444288 531 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 EEF1B2P6-201ENST00000445713 673 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 YWHAQP9-201ENST00000445891 512 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RPS17P15-201ENST00000475609 349 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MTND1P3-201ENST00000484956 952 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 RPL7P51-201ENST00000490532 749 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MTND5P5-201ENST00000503764 376 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 KCTD9P5-201ENST00000504141 1170 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 HMGB1P42-201ENST00000532126 553 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 ARL2BPP2-201ENST00000550907 489 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 HSPE1P2-201ENST00000554777 306 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC090751.1-201ENST00000566966 267 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MIR544B-201ENST00000582372 78 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 MIR4660-201ENST00000583549 74 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 H3F3BP2-201ENST00000583907 357 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC005498.1-201ENST00000592125 465 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 BNIP3P11-201ENST00000603878 563 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL133338.2-201ENST00000604292 736 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 BNIP3P10-201ENST00000605360 577 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL451049.1-201ENST00000608672 497 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC015712.7-201ENST00000615211 635 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC009233.1-201ENST00000616477 371 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 AC091905.1-201ENST00000624400 311 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 SNORA17.5-201ENST00000630429 132 ntBASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SEC61A2Q9H9S3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 U8.3-201ENST00000363321 132 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AL121972.1-201ENST00000402023 252 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 Y_RNA.608-201ENST00000410647 95 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC007390.1-201ENST00000415722 356 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 USP9YP9-201ENST00000429406 715 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 ATP5HP2-201ENST00000433885 485 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 SKP1P1-201ENST00000438081 489 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MTND1P18-201ENST00000448191 573 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 C1DP4-201ENST00000455429 424 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 BTF3P5-201ENST00000457252 467 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 RN7SL273P-201ENST00000481561 299 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 ATP5LP5-201ENST00000483050 299 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC007182.2-201ENST00000489251 402 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 MTCO3P9-201ENST00000506989 781 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 POU5F1P7-201ENST00000508759 541 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 RNU6-1281P-201ENST00000516223 105 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 RNU2-46P-201ENST00000517038 113 ntBASIC4.98□□□□□ -1.61
SEC61A2Q9H9S3 SNORA43.3-201ENST00000517240 103 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms