Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 RNU2-27P-201ENST00000516185 142 ntBASIC4.85□□□□□ -1.63
USP47Q96K76 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.85□□□□□ -1.63
USP47Q96K76 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.85□□□□□ -1.63
USP47Q96K76 AL159169.2-201ENST00000610061 1269 ntBASIC4.85□□□□□ -1.63
USP47Q96K76 AL355365.1-201ENST00000616480 294 ntBASIC4.85□□□□□ -1.63
USP47Q96K76 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP47Q96K76 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.85□□□□□ -1.63
USP47Q96K76 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.85□□□□□ -1.63
USP47Q96K76 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.85□□□□□ -1.63
USP47Q96K76 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP47Q96K76 USP8P1-201ENST00000494673 3183 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
USP47Q96K76 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
USP47Q96K76 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
USP47Q96K76 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP47Q96K76 RNU6-1331P-201ENST00000363658 106 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP47Q96K76 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 AC002524.1-201ENST00000411687 547 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.84□□□□□ -1.63
USP47Q96K76 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.84□□□□□ -1.63
USP47Q96K76 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP47Q96K76 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.84□□□□□ -1.63
USP47Q96K76 RPL21P13-201ENST00000488305 481 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 AC026784.1-201ENST00000507986 352 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 PCBP2P3-201ENST00000509726 843 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.84□□□□□ -1.63
USP47Q96K76 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP47Q96K76 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.84□□□□□ -1.63
USP47Q96K76 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.84□□□□□ -1.63
USP47Q96K76 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.84□□□□□ -1.63
USP47Q96K76 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.84□□□□□ -1.63
USP47Q96K76 AC141257.3-201ENST00000572906 215 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.84□□□□□ -1.63
USP47Q96K76 AL122125.1-201ENST00000616999 600 ntBASIC4.84□□□□□ -1.63
USP47Q96K76 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
USP47Q96K76 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP47Q96K76 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
USP47Q96K76 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
USP47Q96K76 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.84□□□□□ -1.64
USP47Q96K76 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP47Q96K76 GCNT6-201ENST00000379591 934 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 MIR137-201ENST00000385223 102 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 SNORA48.2-201ENST00000390926 124 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 Z99755.1-201ENST00000414048 380 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 VN1R31P-201ENST00000417498 730 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.83□□□□□ -1.64
USP47Q96K76 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.83□□□□□ -1.64
USP47Q96K76 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.83□□□□□ -1.64
USP47Q96K76 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.83□□□□□ -1.64
USP47Q96K76 RPL6P9-201ENST00000466502 859 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.83□□□□□ -1.64
USP47Q96K76 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.83□□□□□ -1.64
USP47Q96K76 RNU1-103P-201ENST00000516502 125 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
USP47Q96K76 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.83□□□□□ -1.64
USP47Q96K76 OR10D4P-201ENST00000525892 951 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.83□□□□□ -1.64
USP47Q96K76 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.83□□□□□ -1.64
USP47Q96K76 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.83□□□□□ -1.64
USP47Q96K76 BNIP3P38-201ENST00000601117 544 ntBASIC4.83□□□□□ -1.64
USP47Q96K76 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.83□□□□□ -1.64
USP47Q96K76 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.83□□□□□ -1.64
USP47Q96K76 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP47Q96K76 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.83□□□□□ -1.64
USP47Q96K76 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP47Q96K76 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP47Q96K76 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP47Q96K76 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
USP47Q96K76 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP47Q96K76 BOLA3P4-201ENST00000418151 400 ntBASIC4.82□□□□□ -1.64
USP47Q96K76 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.82□□□□□ -1.64
USP47Q96K76 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.82□□□□□ -1.64
USP47Q96K76 MTND6P6-201ENST00000478031 263 ntBASIC4.82□□□□□ -1.64
USP47Q96K76 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.82□□□□□ -1.64
USP47Q96K76 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
USP47Q96K76 IGKV2-26-201ENST00000518305 343 ntBASIC4.82□□□□□ -1.64
USP47Q96K76 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.82□□□□□ -1.64
USP47Q96K76 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.82□□□□□ -1.64
USP47Q96K76 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.82□□□□□ -1.64
USP47Q96K76 SNORA35B-201ENST00000607417 129 ntBASIC4.82□□□□□ -1.64
USP47Q96K76 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.82□□□□□ -1.64
USP47Q96K76 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP47Q96K76 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP47Q96K76 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP47Q96K76 AL513302.2-201ENST00000562313 1842 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 MIR128-1-201ENST00000384921 82 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 RNA5SP120-201ENST00000410900 112 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 AC098592.2-201ENST00000413158 265 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.81□□□□□ -1.64
USP47Q96K76 AL591503.2-201ENST00000442314 1005 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.81□□□□□ -1.64
USP47Q96K76 AL357552.1-201ENST00000445254 415 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 RPL21P10-201ENST00000463521 490 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 RN7SL807P-201ENST00000470923 297 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 AP001960.1-201ENST00000506494 658 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 HIGD1AP18-201ENST00000520730 278 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 AC022616.2-201ENST00000523185 300 ntBASIC4.81□□□□□ -1.64
USP47Q96K76 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms