Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC008065.1-201ENST00000428525 348 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AL356535.1-201ENST00000440335 398 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AC017015.1-201ENST00000477387 286 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC1.1□□□□□ -2.23
SYNE1Q8NF91 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
SYNE1Q8NF91 HMGB1P19-201ENST00000517578 577 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AC128687.2-201ENST00000609657 566 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AL354976.1-201ENST00000613843 387 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AC119674.1-212ENST00000641155 993 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
SYNE1Q8NF91 AP002001.2-201ENST00000529025 1469 ntBASIC1.1□□□□□ -2.23
SYNE1Q8NF91 SNORA38.1-201ENST00000364172 131 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 RHOT1P2-201ENST00000366423 333 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 HDGFP1-201ENST00000405943 252 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 VN1R8P-201ENST00000407739 893 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 OOSP1P1-201ENST00000423265 274 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 HMGB1P37-201ENST00000439613 609 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 ARL4AP3-201ENST00000441452 574 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AL589765.3-201ENST00000446084 462 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC005726.1-201ENST00000494679 427 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 CDC27P2-201ENST00000425026 1922 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 OR52B1P-201ENST00000316506 909 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 RNF19BPX-201ENST00000426224 625 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AL591503.2-201ENST00000442314 1005 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 CYP4A43P-201ENST00000568156 121 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC068020.1-201ENST00000594215 661 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 SNORA62.6-201ENST00000606322 83 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC016957.2-201ENST00000616998 848 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 NDUFB1P1-201ENST00000435191 180 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC037471.2-201ENST00000564941 598 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC087468.1-201ENST00000604365 630 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 LINC00901.1-201ENST00000617252 152 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AL137790.1-201ENST00000634283 177 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AL139811.1-201ENST00000424779 2299 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 MIR513A2-201ENST00000385249 127 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 ARF4P3-201ENST00000397387 509 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 BX119904.1-201ENST00000432026 348 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC127537.2-201ENST00000439258 465 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 VN1R32P-201ENST00000452234 905 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 FABP3P2-201ENST00000453169 399 ntBASIC1.09□□□□□ -2.23
SYNE1Q8NF91 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
SYNE1Q8NF91 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AL451142.2-201ENST00000429076 2090 ntBASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AC005183.1-201ENST00000603687 1979 ntBASIC1.09□□□□□ -2.24
SYNE1Q8NF91 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 RN7SL504P-201ENST00000494496 287 ntBASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 OR8I1P-201ENST00000529291 931 ntBASIC1.09□□□□□ -2.24
SYNE1Q8NF91 UBTFL9-201ENST00000534504 1148 ntBASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AL121603.1-201ENST00000553815 142 ntBASIC1.09□□□□□ -2.24
SYNE1Q8NF91 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SYNE1Q8NF91 OR56A5-201ENST00000340110 738 ntBASIC1.09□□□□□ -2.24
SYNE1Q8NF91 IARS-201ENST00000375627 697 ntTSL 3 BASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms