Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 OR4C2P-201ENST00000530855 1064 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 AC006518.1-201ENST00000541449 943 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 CCDC58P3-201ENST00000590792 430 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 AL713998.2-201ENST00000604538 1198 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 CFTRP2-201ENST00000634304 199 ntBASIC4□□□□□ -1.77
CCDC112Q8NEF3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC112Q8NEF3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4□□□□□ -1.77
CCDC112Q8NEF3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC112Q8NEF3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC006042.3-201ENST00000454684 1469 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 ZNF542P-204ENST00000482727 1305 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC068647.1-201ENST00000489539 2265 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 SKINT1L-201ENST00000401057 817 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 RNU4-6P-201ENST00000410804 122 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC244033.1-201ENST00000426826 870 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC007389.2-201ENST00000434630 306 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 SETD6P1-201ENST00000444575 317 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 SNRPGP5-201ENST00000456003 220 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 NPM1P41-201ENST00000512920 831 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 RNU6-579P-201ENST00000516879 102 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 OR7E13P-201ENST00000526052 910 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC008507.1-201ENST00000587506 734 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AC005255.1-201ENST00000593748 216 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 AL732618.1-201ENST00000623251 301 ntBASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC112Q8NEF3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AL122126.1-201ENST00000546905 1318 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 RNU6-805P-201ENST00000365643 106 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 CYCSP19-201ENST00000411715 316 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 OR8G2P-201ENST00000412796 908 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 RPL7P15-201ENST00000461190 712 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 RPS27P29-201ENST00000463110 252 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC011037.1-201ENST00000483964 558 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 FTH1P21-201ENST00000512179 511 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 PHBP14-201ENST00000512887 367 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC093331.1-201ENST00000521474 169 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC025260.1-201ENST00000548858 430 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AC022149.2-201ENST00000621061 203 ntBASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC112Q8NEF3 AL161912.2-201ENST00000565707 3007 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 ZNF826P-207ENST00000622273 1910 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 SNORA73.2-201ENST00000364946 201 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 PTMAP2-201ENST00000397627 327 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 EI24P2-201ENST00000397776 1076 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 RNA5SP31-201ENST00000411144 127 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 GLRXP1-201ENST00000423261 334 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 VN1R34P-201ENST00000447387 883 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 AC125238.1-201ENST00000448842 249 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 CYCSP53-201ENST00000455540 265 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 AC022034.3-201ENST00000471393 478 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 RNU2-27P-201ENST00000516185 142 ntBASIC3.97□□□□□ -1.77
CCDC112Q8NEF3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms