Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 MIR4425-201ENST00000580572 84 ntBASIC3.03□□□□□ -1.92
FAM78BQ5VT40 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 AL390816.3-201ENST00000604527 1066 ntBASIC3.03□□□□□ -1.92
FAM78BQ5VT40 AL365503.1-201ENST00000605247 905 ntBASIC3.03□□□□□ -1.92
FAM78BQ5VT40 RMST_8.1-201ENST00000610287 165 ntBASIC3.03□□□□□ -1.92
FAM78BQ5VT40 AC005156.1-201ENST00000613371 573 ntBASIC3.03□□□□□ -1.92
FAM78BQ5VT40 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
FAM78BQ5VT40 AC006042.3-201ENST00000454684 1469 ntBASIC3.03□□□□□ -1.93
FAM78BQ5VT40 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 RNU6-31P-201ENST00000384388 108 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AL590704.1-201ENST00000402856 794 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 SNORA57.3-201ENST00000411095 141 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 NUTF2P3-201ENST00000448540 384 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 RPS27AP13-201ENST00000498403 237 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 HMGB3P15-201ENST00000507326 574 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 ARL2BPP6-201ENST00000512757 439 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 CYCSP29-201ENST00000533731 318 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 MIR4700-201ENST00000578311 74 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 MIR548Y-201ENST00000582739 110 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 KPNA2P3-201ENST00000584190 848 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 MIR3138-201ENST00000585238 82 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC090425.2-201ENST00000608818 501 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 MIR6868-201ENST00000611215 58 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AL672296.1-201ENST00000427780 2158 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 AC007256.1-201ENST00000392253 2765 ntBASIC3.02□□□□□ -1.93
FAM78BQ5VT40 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.02□□□□□ -1.93
FAM78BQ5VT40 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 RNU11-4P-201ENST00000391149 133 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 SNORA48.8-201ENST00000391324 134 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 ARL5AP3-201ENST00000439327 386 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 HMGB1P26-201ENST00000452520 628 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AP002884.2-201ENST00000471647 395 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC117525.1-201ENST00000515228 503 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 SNORA31.9-201ENST00000516429 84 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 RN7SKP60-201ENST00000516985 239 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AP003730.1-201ENST00000524605 285 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 MTND4LP24-201ENST00000572277 291 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 MIR4738-201ENST00000579134 87 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AP000919.1-202ENST00000581139 1264 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 MIR3939-201ENST00000582614 106 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC010928.3-201ENST00000587712 541 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC006116.5-201ENST00000591936 559 ntBASIC3.01□□□□□ -1.93
FAM78BQ5VT40 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.01□□□□□ -1.93
FAM78BQ5VT40 AC012557.1-201ENST00000607115 611 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms