Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 PRELID3BP7-201ENST00000503606 469 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 RNU2-27P-201ENST00000516185 142 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC026333.2-201ENST00000542164 106 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC015911.5-201ENST00000587076 451 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 AC006116.10-201ENST00000591836 581 ntBASIC4.26□□□□□ -1.73
RFX7Q2KHR2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFX7Q2KHR2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC090337.1-201ENST00000579651 2074 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 RNA5SP235-201ENST00000365411 114 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC106901.1-201ENST00000425086 698 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC017083.1-201ENST00000428093 483 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AL365396.1-201ENST00000430854 671 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC005019.1-201ENST00000436455 431 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 CYCSP35-201ENST00000451978 304 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 AC079880.2-201ENST00000603790 1213 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 MIR7851-201ENST00000610611 160 ntBASIC4.25□□□□□ -1.73
RFX7Q2KHR2 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.25□□□□□ -1.73
RFX7Q2KHR2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 CDY3P-201ENST00000454543 1618 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 PNPT1P2-201ENST00000456768 2050 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 MTND4P22-201ENST00000413116 1169 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 HSFY4P-201ENST00000415994 1181 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 RPS20P1-201ENST00000434853 354 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 NPM1P48-201ENST00000436002 853 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AC009263.1-201ENST00000441193 1239 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AL591503.2-201ENST00000442314 1005 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 RPL21P13-201ENST00000488305 481 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 FCF1P3-201ENST00000496394 590 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AC093663.1-201ENST00000497190 394 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 ARL2BPP6-201ENST00000512757 439 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AC078899.5-201ENST00000612475 178 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.24□□□□□ -1.73
RFX7Q2KHR2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.24□□□□□ -1.73
RFX7Q2KHR2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 AC073073.2-201ENST00000609827 2578 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 FRG1CP-201ENST00000358464 769 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 MIR634-201ENST00000385208 97 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 RHEBP3-201ENST00000411920 351 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 HSFY1P1-201ENST00000423928 1178 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 CYCSP32-201ENST00000440548 321 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 SNRPFP2-201ENST00000440710 251 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 RPL26P28-201ENST00000451325 435 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 BX510359.1-201ENST00000456973 237 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 U3.44-201ENST00000458938 192 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 AGGF1P3-201ENST00000493675 1213 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.23□□□□□ -1.73
RFX7Q2KHR2 IGLVIV-53-201ENST00000520107 367 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 HMGB3P26-201ENST00000560051 582 ntBASIC4.23□□□□□ -1.73
RFX7Q2KHR2 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms