Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HSPG2P98160 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.06□□□□□ -2.08
HSPG2P98160 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.06□□□□□ -2.08
HSPG2P98160 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.06□□□□□ -2.08
HSPG2P98160 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 RNU1-15P-201ENST00000353977 144 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 Y_RNA.226-201ENST00000364337 114 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.06□□□□□ -2.08
HSPG2P98160 AL513174.1-201ENST00000423182 629 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AC023598.1-201ENST00000472521 361 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AC109458.1-201ENST00000508858 316 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 DUXAP6-201ENST00000553858 601 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.06□□□□□ -2.08
HSPG2P98160 AC243829.7-201ENST00000633081 225 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.06□□□□□ -2.08
HSPG2P98160 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HSPG2P98160 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HSPG2P98160 RPL35AP12-201ENST00000425362 338 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.06□□□□□ -2.08
HSPG2P98160 AL136097.1-201ENST00000456945 913 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 snoU13.26-201ENST00000459452 105 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 RPS29P21-201ENST00000496272 170 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.06□□□□□ -2.08
HSPG2P98160 RN7SL371P-201ENST00000578099 267 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.06□□□□□ -2.08
HSPG2P98160 AC025754.2-201ENST00000606491 432 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.06□□□□□ -2.08
HSPG2P98160 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.06□□□□□ -2.08
HSPG2P98160 AC091905.1-201ENST00000624400 311 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 TOPORSLP1-201ENST00000467693 2102 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HSPG2P98160 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 AC233981.1-201ENST00000423224 461 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 RPL7P12-201ENST00000446719 750 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.06□□□□□ -2.08
HSPG2P98160 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.06□□□□□ -2.08
HSPG2P98160 AC008489.1-201ENST00000524271 483 ntBASIC2.06□□□□□ -2.08
HSPG2P98160 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.06□□□□□ -2.08
HSPG2P98160 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HSPG2P98160 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 RNU4-47P-201ENST00000410876 114 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.05□□□□□ -2.08
HSPG2P98160 AC126389.1-201ENST00000477436 290 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
HSPG2P98160 HMGB1P3-201ENST00000502802 616 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 AC011270.1-201ENST00000558606 583 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 AL133457.1-201ENST00000564251 987 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 AC138965.3-201ENST00000623875 498 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.05□□□□□ -2.08
HSPG2P98160 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HSPG2P98160 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HSPG2P98160 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.05□□□□□ -2.08
HSPG2P98160 A2MP1-204ENST00000566278 4130 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC2.05□□□□□ -2.08
HSPG2P98160 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.05□□□□□ -2.08
HSPG2P98160 YWHAQP9-201ENST00000445891 512 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.05□□□□□ -2.08
HSPG2P98160 BNIP3P41-202ENST00000616656 861 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC2.05□□□□□ -2.08
HSPG2P98160 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 AC018529.3-201ENST00000624212 2254 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HSPG2P98160 MIR512-1-201ENST00000384913 84 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 RN7SL585P-201ENST00000470538 280 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HSPG2P98160 AC112198.1-201ENST00000505369 1220 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 VN1R90P-201ENST00000595717 726 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.05□□□□□ -2.08
HSPG2P98160 AC000403.1-201ENST00000613696 3585 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.05□□□□□ -2.08
HSPG2P98160 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HSPG2P98160 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.05□□□□□ -2.08
HSPG2P98160 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC2.05□□□□□ -2.08
HSPG2P98160 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HSPG2P98160 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HSPG2P98160 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.05□□□□□ -2.08
HSPG2P98160 AC092435.4-201ENST00000623012 4159 ntBASIC2.05□□□□□ -2.08
HSPG2P98160 SNORA7.4-201ENST00000384249 137 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms