Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 DCAF13P3-201ENST00000561147 1334 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
H3F3AP84243 AL118496.1-201ENST00000440201 1812 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3AP84243 AC007066.1-201ENST00000392902 381 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC240504.1-201ENST00000395709 845 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC127526.1-201ENST00000417526 366 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.29□□□□□ -1.88
H3F3AP84243 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3AP84243 AC017083.1-201ENST00000428093 483 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AC007389.2-201ENST00000434630 306 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 NDUFB1P1-201ENST00000435191 180 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AL645931.1-201ENST00000439737 410 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC099563.1-201ENST00000456086 418 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AL136097.1-201ENST00000456945 913 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 SNORD108-201ENST00000459332 71 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AL672167.3-201ENST00000465951 960 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 RPL23AP14-201ENST00000468281 468 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.29□□□□□ -1.88
H3F3AP84243 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.29□□□□□ -1.88
H3F3AP84243 AC006130.2-201ENST00000586202 326 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AL391834.1-201ENST00000609609 560 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AC004943.3-201ENST00000624116 600 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AP003072.4-201ENST00000624580 310 ntBASIC3.29□□□□□ -1.88
H3F3AP84243 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
H3F3AP84243 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3AP84243 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.29□□□□□ -1.88
H3F3AP84243 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3AP84243 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
H3F3AP84243 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 RNU6-673P-201ENST00000365084 104 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H3F3AP84243 RN7SKP202-201ENST00000410439 330 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3AP84243 HMGB3P20-201ENST00000417997 600 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AC245054.1-201ENST00000420944 258 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AC092017.2-201ENST00000427600 362 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AL445584.1-201ENST00000431451 330 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3AP84243 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.28□□□□□ -1.88
H3F3AP84243 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3AP84243 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 AL359073.1-201ENST00000448036 403 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.28□□□□□ -1.88
H3F3AP84243 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3AP84243 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.28□□□□□ -1.88
H3F3AP84243 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3AP84243 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.28□□□□□ -1.88
H3F3AP84243 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.28□□□□□ -1.88
H3F3AP84243 MTND4LP31-201ENST00000514859 294 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 RNU6-319P-201ENST00000516025 108 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 RANP9-201ENST00000519957 271 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H3F3AP84243 AC008011.1-201ENST00000545989 227 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3AP84243 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.28□□□□□ -1.88
H3F3AP84243 AC112230.1-201ENST00000604342 547 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AC012557.1-201ENST00000607115 611 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3AP84243 AL121772.2-201ENST00000614331 297 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AL732618.1-201ENST00000623251 301 ntBASIC3.28□□□□□ -1.88
H3F3AP84243 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.28□□□□□ -1.88
H3F3AP84243 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
H3F3AP84243 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H3F3AP84243 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3AP84243 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.27□□□□□ -1.89
H3F3AP84243 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3AP84243 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
H3F3AP84243 RNA5SP51-201ENST00000364750 119 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 MIR320B1-201ENST00000390209 79 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AL590704.1-201ENST00000402856 794 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 MOB1AP1-201ENST00000430903 535 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 KCTD10P1-201ENST00000434203 625 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 SKP1P1-201ENST00000438081 489 ntBASIC3.27□□□□□ -1.89
H3F3AP84243 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.27□□□□□ -1.89
H3F3AP84243 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.27□□□□□ -1.89
H3F3AP84243 RPL7P48-201ENST00000461513 746 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms